YALI0F20130g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F20130g

Location

Species Yarrowia lipolytica Positions 2679832..2680923
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1092 (nuc.)
Previous locus YALI0F20108g Next locus YALI0F20152g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20130g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20130gYALI0F20130g_mRNA-001YALI0F20130g_CDS-001

Nucleotide sequence

 

>YALI0F20130g
ATGACGACCATCCCTGAACTATCAGTCTACACCATGCAACAAAGATATCTACAACCCTAT
GACGACGACACTCTGGTCGAAGAGATTCCACCTACAAATGCCGAGGTGGGAATTGTGCCA
TTTGATGATCTGGAACTGGTGGCCGAAAGTCAGCCTCCTTGCGATACCTGGAAGAACTGC
GTCTTATCATATAAGATGATAGTCCAGGGCTATGACAATGAAATCCTGACCCATGAAGGA
CAGTTGCAAACGAATTTCGTACCGGGCATGTCTACCGCCATTTGCATGACTTCAAATCTG
AATTTTGAACCCCACATGACTCCCGAAGACGTGCAACGGGTCACTTTGGCTGCTTTGGTT
CGTGACCGTCCTCCTCCTGAGGTGGACGAGGAGTCTGACAATGAGCTATGTGCACGTCAG
AGTATGGCCATCTACGAAAGATACAAGGGCCGAATGAGCGAATTGTGGCGCGACATGCCT
GAATTGCCATTATTTGAAGATGGAGACAGCAAGACTACTCCTAAGGCTTCTTCTGAAGAT
GATCCCTCAACTTATGCCGATGGGTACCAGAACGAGGCAGGCGCTACTGCGAACGATTCC
CAAAACGAGAACGATGGTATAGGATATCAGGGTGTCGATAATTCTCTTCTTCCAGGATGT
GACCCAAGCTCAGACTCGCATTATTCAGATTCAGACAGACCATGTACATCGCATTCAATA
TCTGGTGGAGAAGCTGTAAAGAGAACCCAGATGCTCAAAGACAGACGACTCTGGAAACGA
GCCAACGAACCCCAGTTCATCACTTGCACTTCTTGTCCCCGAAAGAGCTTCAAAAGTCTC
GCCAAATACGCGAAACATCTTGACACCCACCATAGTGGACTCTCCAACGAACACTTGTGT
CCTTCTAAGACCTGCCCAAGATCGATTGTTGGCTTCAGTACTGCTGTTGGATGTTCTCAA
CATTTCAACATCTGTCACAGAAACCATGACAGGATATTCGAACTCAAGTGCAGAAAGTGG
TATCTGAAGAGATGGCGGCTAAAACCCGAGATACCCTGTCTGTCAATGTATGTGTTCATG
GTAGACATTTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20130g_CDS-001

Protein length: 364 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F20130g_CDS-001 MTTIPELSVYTMQQRYLQPYDDDTLVEEIPPTNAEVGIVPFDDLELVAESQPPCDTWKNC
VLSYKMIVQGYDNEILTHEGQLQTNFVPGMSTAICMTSNLNFEPHMTPEDVQRVTLAALV
RDRPPPEVDEESDNELCARQSMAIYERYKGRMSELWRDMPELPLFEDGDSKTTPKASSED
DPSTYADGYQNEAGATANDSQNENDGIGYQGVDNSLLPGCDPSSDSHYSDSDRPCTSHSI
SGGEAVKRTQMLKDRRLWKRANEPQFITCTSCPRKSFKSLAKYAKHLDTHHSGLSNEHLC
PSKTCPRSIVGFSTAVGCSQHFNICHRNHDRIFELKCRKWYLKRWRLKPEIPCLSMYVFM
VDI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG