YALI0F19668g

Overview

Description weakly similar to uniprot|P38428 Saccharomyces cerevisiae YMR264W (ohnolog of YML101C) CUE1 involved in ubiquitination and degradation at the ER surface
Locus type CDS
Locus tag YALI0F19668g

Location

Species Yarrowia lipolytica Positions 2617803..2618525
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 723 (nuc.)
Previous locus YALI0F19646g Next locus YALI0F19690g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19668g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19668gYALI0F19668g_mRNA-001YALI0F19668g_CDS-001

Nucleotide sequence

 

>YALI0F19668g
ATGGACGATGCCACGACGATCAACGCGGTGATCGCAATTCTAGTCATCTTTGTCGTTCTC
CGGTACGTGATCTTCAATGGCTCCGAGGAACATAATCCCAACCCAGACGCCCCCATTGCT
CACAGACCCGATGAGTTCCGGGAGCTGTCCAACATCGAGCAGCATGCCGCCGCCCTGCAG
GCCGAGCGAATCACACGAGAGTACGACGAGCGACAGCGGCGACCGGTGACCCAGAGCATG
ATTGAGGTGGTCCAGGCCATTGCTCCTAACGTATCTGTGGCTCAGATCCGATGGGATCTG
GAAAAGACAGGCAACATCGAGGCCACTGTGGAGCGATATCTGAGCGAGGGCACCCTCCCT
CATCCCCCCAAGTACGATCCCGAACCTGCATCCACGTCCAGCACACGAAATCCTACAGAG
CCATCAAAGGCCAGCAAGATGGAGTGGAAGAACACAAAAGAGGAGCGACAGGAGCAACTG
CTCAAGCAGCGACAAACCATGCTGGAGGACGCCCGAAAGAAGTTTCTGGACAAGAAGTAA
AATGTTTATAGAGGACAACAGTAATTATTATGGCGGTTTTAGCACAACAGGGAGTAAGGG
GATGATACTGTACAGGACTATAAAACAGTGTACAGTATCAGTTGAGGTTCTAGTCGTTTC
AATCTATTAGTATCTATCTATGTCTATAATGAATGTGAGTTAATGAGTGGGTTGGATGTG
ATC

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F19668g_CDS-001

Protein length: 180 aa.
Product: Conserved hypothetical protein

>YALI0F19668g_CDS-001 MDDATTINAVIAILVIFVVLRYVIFNGSEEHNPNPDAPIAHRPDEFRELSNIEQHAAALQ
AERITREYDERQRRPVTQSMIEVVQAIAPNVSVAQIRWDLEKTGNIEATVERYLSEGTLP
HPPKYDPEPASTSSTRNPTEPSKASKMEWKNTKEERQEQLLKQRQTMLEDARKKFLDKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG