YALI0F19228g

Overview

Description weakly similar to uniprot|P39105 Saccharomyces cerevisiae YMR008C (ohnolog of YOL011W) PLB1 phospholipase B (lysophospholipase)
Locus type CDS
Locus tag YALI0F19228g

Location

Species Yarrowia lipolytica Positions 2567537..2570568
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3032 (nuc.)
Previous locus YALI0F19206g Next locus YALI0F19250g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19228g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19228gYALI0F19228g_mRNA-001YALI0F19228g_CDS-001

Nucleotide sequence

 

>YALI0F19228g
ATGCAGTTTACGCCCTTATTCCTGCATTTGGTGGCCACTCTTGCCGCTTCCCCTGGCGGC
ACATATGAGCCCAAACATGTTGATTGTCCCCCAACCGTACTGGTTCGAGAGGCCAACGAT
ACCCTCAATCCCAAAGAGAAAGACTACATGGACCGGCGATGGCTGCAGACTCAGCAAGAA
CATGTCAAGTTTATGGAACGTCTCGACATTCCCGACTTCAACGTCTCCTTCTTGGACGAA
GTCCCCCCTGTCGTGATGGGAACTGCCTTCTCTGGAGGTGGTTATCGATCCATGTTGACA
GGAGCAGGTGTCGTTGCTGCCATGGACGCCCGTGTAAACGGGTCTCTTGACCTTGGCGCG
CTGGGTGGTCTCTTCCAAGCAATGTCCTACTTGGTGGGCTTGTCCAGTGGAAGTTGGTTG
TTGACCTCTCTCTTTCTGAACGACAACTTCACTGTTCCTGACCTTCAGGCTGCTCCTAAC
CTCTGGAGTCTCGAGAACTCATTCTGGGGTGGAGAACGAATGAAGGACGTCCAGCTTGAC
AACCCCGTTCCCAACCCTGGTATTATTGATAACAACGGAACCGAGAGTGACAACAGTTCT
CTTGTCATTGGATCTGGCCTGACAGATCGTCTGAGCTCTCGACTGAAGAATCTCGTCAAT
CTAGCTCCTCGGAACATCGTTTCCGACTCAATCAAGCACCACTGGAATCGACGACCTTCG
ACCGGTGGAGCTGAGGTTGTCAAAAACATTAACCTCAACGACATGTTGGCCAAACGACCT
AACTCTGGTATCGCTGAGCGTCTTCGAAACATGCCTCCAATCGGTGAGAGCATTTCCAAT
GGTCGGCGTACTCGTCCTAGCACTGGTTTTGCTGACCGTCTGAGAAACAGACCGAAGACT
GGAATCTCTGACAGACTACACCACCGTCCCAGTACTGGACTCTCTGATCGGCTGCGAAAC
AGGCCCAGTACTGGCGTTTCCGACACCTGGAAGAATCGACCCAAGACTGGCTATGCTGAT
CGGCTCAAGAATTCTCAACGGCCCCACTTCGATCTCGCCCAACGACTCAGAAATAGACCC
AAGACAGGAATATATGATAACGTCGACAAGGGGATCTCTCGAATAAAACCTGGGTTGTCT
GATGCCCGAAAGGCTCTTGACAAACACATTCCTTCGAAACCTTCAATGGGTGACTTCTTT
AACCAGAGAAGACGTCAGTCTGATCTCGAAAAGCTCTTGGAGTACGTTTCTCCTGACTTC
CTCTGTGACCTAGACTATTCAGAGTTCCTGAAGTACCTTGACCCTCTGTATACTTATTAC
CACCTGGAGAATGAGATCAAGCAGACCCTGTACTACTTCCTGATGATCAAGGAAGAGGTC
GACCTGAAATCCAGTGCTGGTTTTGTGACCACTATCACTGATTACTGGGGTCGAGCACTC
GCCCGTCAGCTGCTTCCTGATTCTCGAGGAGGACAGGGTACTACCTGGTCCGATGTTCAA
ATCACACCTCAGTTCATGAACGCATCTGTGCCTTTCCCTATCATGGTTGCGATTGGTCGA
GAGCCCTCCGAGTCTAACAGTACCTACATGATCTCTCCTCTTTGGTCGACTCTCTTCGAA
ATGACTCCCTTCGAGTTTGGATCTTGGAACCCTTCTTTAAACGCCTTCTCTGACACTCGA
TACCTTGGTTCATCCCTCTATAATGGGACCCCCGTCAACAATGTTACCCTTGAGCCTGTT
CCCTCAACTGAGCCCGTTTGTGTCTTGGGATATGATAATGCTGGTTTCCTTGCCGGCACT
TCTTCCTCTGTCTTCAATGATCCTTTCGAGAATTCGGGTATCGATCAGGACTACATTCGA
GAGCTCTTTACTGGTATCATTGATGCCCTTGAGAATTTCAATACCTCTTTCTGGGGTGAA
TTCTTTTCTACAGAGAACAGCACTGTCCCTGAAACTGATCTTACTTGGCGGGACGCCGAC
TATGCCATCTTCTCACCCAACCCCTTCCTTGGGTTTGACTCTAACGCCACCACTGATAAG
TTTTCTGAGTCCAAACATCTTTTCCTGGCTGATGGTGGTGAGGATGGCCAGCTGGTTCCC
TTCGAGCCCCTACTTCAGGAACAGCGTAATGTTGATGTCATCTTCGCCATTGATGCGTCT
TCGAACACTGAGGACAACTTCCCAGATGGAACTGCGCTGCGTATGTCACAAGAGAGATAC
CTTTCGGAGGATTCTGAGCAGGCGGCTGGCATATCGTTTCCCCAGCTGGCTGCAGAGTTT
GGCAATGAACCTGTTTTCCTTGGATGTTTCATAAACTCGTCTTACTCGGTACCACCCAAG
GGGAGAGCCTACAGCTATAACTATCGACGAGACCGTCCTGCCGAGCCCAATATGACTATT
CCTGTATATCCTCCTCCTCCCCCGTTCGATTTCCCTAACTCTACCTTTGATCCTAACTCC
ACTTTTTCAAATGTTAGTATGGCTTCCAGGGCTCACTGGAGAGCCAGACAGATTCCTGTT
TCCAACGGCACTACTAATGATACGGGACCTATAATTCGCCCTCGACCTCGCCCTCGACCC
CGGCCCTCACGACCCCGGCCTATCATCGAAGATGGTCGTGACTATGACGCTGACTATCCT
TATGACCACACTACCCCTATTGGTGCCATTCCAGTCATGCCTCCTACAAATGTTTCCACC
GACCCCTTTGTCAACGTTACTGTTGGTGTCGACAAGTACCCTCCTCTCATTGTGTATATC
CCAAACAGCTACCAATCTTACTGGACCGGTGATAGTACTTTCCAGGTTGAGTTTTCCACC
GAGGATGTTGCCGGCTACATTACCAACGGCTACAATCTGATGACCAGACAGAACTCCACT
GTCGACCCCGACTGGAATAAGTGCGTTGGTTGTGCCACTATTCTCCGGGCTTATCAGGGA
GCCAACAAGACCATCCCAGACTTTTGCATGGGATGTTTCGATCGATATTGTGTTGATTCA
AGTAAATGATGTTAATATATGACTCTTGTATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19228g_CDS-001

Protein length: 1003 aa.
Product: Conserved hypothetical protein

>YALI0F19228g_CDS-001 MQFTPLFLHLVATLAASPGGTYEPKHVDCPPTVLVREANDTLNPKEKDYMDRRWLQTQQE
HVKFMERLDIPDFNVSFLDEVPPVVMGTAFSGGGYRSMLTGAGVVAAMDARVNGSLDLGA
LGGLFQAMSYLVGLSSGSWLLTSLFLNDNFTVPDLQAAPNLWSLENSFWGGERMKDVQLD
NPVPNPGIIDNNGTESDNSSLVIGSGLTDRLSSRLKNLVNLAPRNIVSDSIKHHWNRRPS
TGGAEVVKNINLNDMLAKRPNSGIAERLRNMPPIGESISNGRRTRPSTGFADRLRNRPKT
GISDRLHHRPSTGLSDRLRNRPSTGVSDTWKNRPKTGYADRLKNSQRPHFDLAQRLRNRP
KTGIYDNVDKGISRIKPGLSDARKALDKHIPSKPSMGDFFNQRRRQSDLEKLLEYVSPDF
LCDLDYSEFLKYLDPLYTYYHLENEIKQTLYYFLMIKEEVDLKSSAGFVTTITDYWGRAL
ARQLLPDSRGGQGTTWSDVQITPQFMNASVPFPIMVAIGREPSESNSTYMISPLWSTLFE
MTPFEFGSWNPSLNAFSDTRYLGSSLYNGTPVNNVTLEPVPSTEPVCVLGYDNAGFLAGT
SSSVFNDPFENSGIDQDYIRELFTGIIDALENFNTSFWGEFFSTENSTVPETDLTWRDAD
YAIFSPNPFLGFDSNATTDKFSESKHLFLADGGEDGQLVPFEPLLQEQRNVDVIFAIDAS
SNTEDNFPDGTALRMSQERYLSEDSEQAAGISFPQLAAEFGNEPVFLGCFINSSYSVPPK
GRAYSYNYRRDRPAEPNMTIPVYPPPPPFDFPNSTFDPNSTFSNVSMASRAHWRARQIPV
SNGTTNDTGPIIRPRPRPRPRPSRPRPIIEDGRDYDADYPYDHTTPIGAIPVMPPTNVST
DPFVNVTVGVDKYPPLIVYIPNSYQSYWTGDSTFQVEFSTEDVAGYITNGYNLMTRQNST
VDPDWNKCVGCATILRAYQGANKTIPDFCMGCFDRYCVDSSK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG