YALI0F18942g

Overview

Description similar to uniprot|P38249 Saccharomyces cerevisiae YBR079c RPG1 translation initiation factor eIF3 (p110 subunit)
Locus type CDS
Locus tag YALI0F18942g

Location

Species Yarrowia lipolytica Positions 2531144..2534059
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2916 (nuc.)
Previous locus YALI0F18920g Next locus YALI0F18964g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18942g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18942gYALI0F18942g_mRNA-001YALI0F18942g_CDS-001

Nucleotide sequence

 

>YALI0F18942g
ATGGCTCCCCATCAGAACGTCCGTCCCGAGACGGTCTTGAAGCGAACCGACGAGCTTATT
GCCGTGGGCCAGCAGGATGCTGCTCTGGAGCTTCTCCACGAGACTGTGTCTGCCCGAAAG
GCCCGAACCACTTCTGTGGCTACTCTGGAGCCCATCGTGGCTCGATTTGTGCAACTTTCC
GTTGACCTGCGCAAGGGCAAAATTATTAAGGATGGTCTTCACCAGTACAAGAAGATCGTG
CAGTCCACCAACGTGAACGCCATTGAGCCTGTTATCAAGCAGTTTCTGTCTCTGGCCGAG
CAGCGAGTTACTGATGCTCAGGCCCAGGCTGACAAGATTGCCGACGAGGAGGAGGCTGAC
GATCTGGAGGCCGAGGAGACGCCTGAAGACCTGCTTCTGGCCACGGTGTCCTCCGAGGAC
ACCAAGGACCGAACTGACCGACGGGTCGTAACCCCCTGGCTCAAATTCCTGTGGGAGGCC
TACCGAAGCGTGCTGGACGTTCTGCGAAACAACAGCAAGCTGGAGGTCATCTACCAGCAG
GTGGTCGAGCAGGCCTTCAACTTCTGTCTGAAGTTTTCTAGAAAGACCGAGTTCCGACGA
CTCTGTGAGCTTCTGCGATCCCATCTGCAGACCACTGCCCAGAAAGGCCCCAACGCTCCC
CCCGTGACCGCAACTTCTGTCGATCTGTCTGATGCTGACACTCTGCAGCGGTACCTTGAC
ACCCGGTTCTCACAGCTCAACGTGGCCGTCAAGCTGGAGTTGTGGCAGGAGGCCTTCCGA
TCCGTCGAGGATGTGCACACCCTGCTGACAGTTTCCAAGCGACCCGCCAAGCCCCTGATG
ATGGGTAACTACTACGAGAACCTGGCCCGAATCTTCCTGGTCGCCGGAAACTACCTCTTC
CACGCTGCGGCCTGGAACAAGCTCTTCCACCTGCTGTCCCAGTCTCCCCGAGGTGCCATC
CCCGTGTCCGAGTACCAGCGAGTCGCCTCTTTTGTGCTTCTGTCTGCCCTCGCCATCCCC
CACAACTCCAGCGCCGAGGATCGATACCGAAACACCCGGCTCACTGGTCTGCTCAACCTG
CAGCGAACCCCCACTCGAGACGCTCTTCTCAAGTCTGCGCTGTCCCGAAACATTCTGGCT
CACGTCAAGCCTGAGATCAAGGCTCTGTACAAGACTCTGGAGGTCGACTTTCACCCTCTG
TCTATTCGAGCCAAGCTGACCCCCGTGGTTGGCGCTATCGCTGAGGCCCCCGAGTTCAAG
CCCTACTTTGCCCCTCTTTACCAGGTCATTCTCACCCGGCTCTTCCAGCAGCTGTCGCAG
GTCTACGAGTCCGTCAAGCTTGACTTTGTCATCCAGTTGGCTACTTTCCCTGCCCCTTTC
TCTGCTACCCCTCTGGAGATTGAGCAGTTCATTGTCCGAGCCTGTGCTCAGGGCGAGCTG
GCCATTAAGATTGACCACGACCAGCGATCCGTGCTGTTCGAGGAGGTCCGAGCCGCCACA
GGCTCTGCTTCTCTGCAGGACACTCCCATTGAAATTGTTCGAACCCAGCTCTCTCGGCTT
GGTCGAACTCTCTCTGTTGCTGACCCTCTCAACTCCGCCGAGGCTCGAGAGCAGCAGTAC
GTGGCTGCTCTCACTACTGCTCAGGACAATGCTGAGCGAGAGCACGCCGAGACTCTGGCT
CGACGAGCTGAAATTGAGGCCCGAAAGGCCCAGGCTGAAGCCGAGCGAGCTCAGCGAGAG
GAAGAGGAGGCTCGAAAGCGAGCTCAGCGACTTCTGGACGAGGAGCTCGCCGAGAAGGAG
CGTCTGGCTGCCGAGCAGCACGCCCGAGAGCTCGAGCGGATCCGAAAGGAGCAGGACGCC
ATCCGAGAGGAGGAGAAGAAGAAGCTGGCCGAGGAGATCAACGCGAAGGGTATCATCACT
ATCGATCTCGACAAGCTCGAGGGTCTGGACACCAACGCTCTGCGAAAGATGCAGGTGGAC
CAGCTGGCCAAGGAGACCAAGGAACTTGGAGACCGACTCCGAGTCACTGCTCGGCGAATC
GACCACACTGAGCGAGCCTACCGAATGGAGGAGATCAAGCTGGTGGAGGACGACTTTGTC
AAGCAGAAGCAGCGAGACCGAGAGATCTACGATACTCGAATCAAGCTCATCAAGGACACC
GCCAAGGCCGAGCACGACGCCAAGGTCGAGCTGGCCAAGCGTCTGCAGCGAGCCGTTCCC
TTCTACAAGTCTTTCCGTGACGATATCCGTGTCAAGCGAGAGGCTGAGTTTACTCGTCTT
CGAGAGGAGGCCGTCAAGAATCTCGCCGAGGCTAAGGCTGCTCGAATCGAGGAGGTCAAG
GCCAAGCGAATCGCTGACGCCAAACGAGCTGAGGAAGAGGCCAAGGCTGCCGCTGAGGCA
GAGGCCAAGGCTGCTGCTGAGGCGGAAGCCAAGGCCAAGGCCGAGCAGGAGATGCGAGAG
AAGCTGCTGGCAGAGAAGAAGGCCCGAGAGGAGGCCAACGCACGAGCCGACGCCGCCTAC
GAGAAGCAGCGACAGAAGGAGGCCGAGTTGGAGGCCAAGCTGGAAGCCAAGCGAGCCGGC
TTCTCCGGAGCTGGTCGACAGGCCCCTCCCAGCGGTGGCTACGTTCCTCCTTCGCGACGA
GAGGGTGGATACGTCCCCCCCAGCCGACGAGGAGATGCTGGAGCCGCTCCTGGAGCTGGC
TCTGGAGGTTACACTCCTCCTAGCCGACGAGAAGGTGGCGGAGGCGGATATGTTCCCCCC
AGCCGACGAGAAGGTGGCGGAGGAGGCTACGTTCCTCCTTCTCGACGTGAGGGTGGATCT
GGCGCTGGATCTGGAGGCCGATATATTCCTCCTTCCCAGCGAAACTAAAATTAAAGGTGA
TTGGTATAGATTAACAACTGATTTGTTGAGATACGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18942g_CDS-001

Protein length: 956 aa.
Product: eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), putative

>YALI0F18942g_CDS-001 MAPHQNVRPETVLKRTDELIAVGQQDAALELLHETVSARKARTTSVATLEPIVARFVQLS
VDLRKGKIIKDGLHQYKKIVQSTNVNAIEPVIKQFLSLAEQRVTDAQAQADKIADEEEAD
DLEAEETPEDLLLATVSSEDTKDRTDRRVVTPWLKFLWEAYRSVLDVLRNNSKLEVIYQQ
VVEQAFNFCLKFSRKTEFRRLCELLRSHLQTTAQKGPNAPPVTATSVDLSDADTLQRYLD
TRFSQLNVAVKLELWQEAFRSVEDVHTLLTVSKRPAKPLMMGNYYENLARIFLVAGNYLF
HAAAWNKLFHLLSQSPRGAIPVSEYQRVASFVLLSALAIPHNSSAEDRYRNTRLTGLLNL
QRTPTRDALLKSALSRNILAHVKPEIKALYKTLEVDFHPLSIRAKLTPVVGAIAEAPEFK
PYFAPLYQVILTRLFQQLSQVYESVKLDFVIQLATFPAPFSATPLEIEQFIVRACAQGEL
AIKIDHDQRSVLFEEVRAATGSASLQDTPIEIVRTQLSRLGRTLSVADPLNSAEAREQQY
VAALTTAQDNAEREHAETLARRAEIEARKAQAEAERAQREEEEARKRAQRLLDEELAEKE
RLAAEQHARELERIRKEQDAIREEEKKKLAEEINAKGIITIDLDKLEGLDTNALRKMQVD
QLAKETKELGDRLRVTARRIDHTERAYRMEEIKLVEDDFVKQKQRDREIYDTRIKLIKDT
AKAEHDAKVELAKRLQRAVPFYKSFRDDIRVKREAEFTRLREEAVKNLAEAKAARIEEVK
AKRIADAKRAEEEAKAAAEAEAKAAAEAEAKAKAEQEMREKLLAEKKAREEANARADAAY
EKQRQKEAELEAKLEAKRAGFSGAGRQAPPSGGYVPPSRREGGYVPPSRRGDAGAAPGAG
SGGYTPPSRREGGGGGYVPPSRREGGGGGYVPPSRREGGSGAGSGGRYIPPSQRN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG