YALI0F18810g

Overview

Description weakly similar to uniprot|Q09710 Schizosaccharomyces pombe Hypothetical protein C18B11.03c
Locus type CDS
Locus tag YALI0F18810g

Location

Species Yarrowia lipolytica Positions 2510930..2512359
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1430 (nuc.)
Previous locus YALI0F18788g Next locus YALI0F18821t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18810g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18810gYALI0F18810g_mRNA-001YALI0F18810g_CDS-001

Nucleotide sequence

 

>YALI0F18810g
ATGTTTCCTCTTTCATATACAACCATGTCGCGCAAGCTGGGGCCCCACGAAACGTACGCG
GCTACACGAAGCCGTTTCGGTAGCTACTCCAACGTTTTTGTGAGTGCTCGATTAAGAGAC
CCCGCTCCAACCGAGGCAGTTGAATACGCCGTGTGTCAACTGATCCATAATGAACCCATC
CTAGGTGTCACCATTACAGGAGACAAGCCAGGCCAATACGAAATGCACAAACTGAATGCC
GACGACTACGATGTCAAGGACTTCCTGGACACTACGACATTTTGGGATAAGCAGGTGAGT
GAAGCCCAATCCGATCTCCATTACGTGCGGTTTGATCTCACCAAGGCTCACTGGAAAGTT
GTTGGGCTAGACCACGGCCGGGAAGTCCTCTTTCTCTACGACCACACTCTTCTGGACGGA
ATGTCTGGATCTTTTGCATGCCGTCAATTGGTCAAGTCCATCGAGGAATACCGACAAGGC
AAAAGATCTGATGACAATAAGATCCAAGTGTCACAGAAAGAGTTGCCACCACCCGTGGAG
AAACAGATTACCGTTTCCGCTCCTGTCTCCCGACTGGTGAAGGAACTGGCTAACGAGTAT
CTCTTCTCAAAACCCAAAACCTCTTTGCCTCCTCAGGTTCTCCCATGGACGGGGTACTAT
GGTGTCATTGATATGACTACCGAGCAGACAAGCGCGTTTCTGAAAATGTGCAAGGCACAT
TCCATCAGTGGAGGGGCCGGTCTGTATGGTCTTCTGGTGTGCTCGTCGTCAAAGGTGCTT
CATGACAAGTATCCTGACGCAGTTCAGCAACAGGTGAGCGGTTCCATTCCTTGGAATGCT
CGTAAATTCACACCCGGTCAGGACCCCGAACGTCTGGGAATGGTCGTTGGGGAGTCTCTG
TTTGACAACCCGGTTCCCAAGCCTGCAGATGTTGAATTTGGAAGTGGACCAACGATTCCT
TCTGGGTTCCTGGAGGTTGCCAAGGTGTACCAGGATCAGATTAAGAAGGACGGAGTCTCG
ACATGGTTCTCCGGCTATCCTTTCATGCATATCATTGGTCTGATTCCTTTCGTTGACCTG
GAAGACTACTTTGCCTCTCATACCAACAACTACCAGCGGCATGGAATGTACTCTTTGAGC
AACCTGACCGCTCTGGAGACCTCTACTACGGTTGAGCGGCTGCGGTTCTCTCAATGCACA
GGAGGTACTTGTCCTTTCATTCAGTTTTCCACTGTGGGAATAAAGGGTGGCCCCATTAGC
ATCTCAGTTGCCGTTGCTGAGGACGATAGCATTGTTCCGCAGGTAGAAAAGTACGTTGAG
GAGTTCCTTTCGCACATTTCCTAGAGGCACTGGTGCCGTCATAATATATCACATTAATGA
TCATACACATTCACTACAAGTACTTGTACGAGTAGAGTATGTCGATGAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18810g_CDS-001

Protein length: 448 aa.
Product: Conserved hypothetical protein

>YALI0F18810g_CDS-001 MFPLSYTTMSRKLGPHETYAATRSRFGSYSNVFVSARLRDPAPTEAVEYAVCQLIHNEPI
LGVTITGDKPGQYEMHKLNADDYDVKDFLDTTTFWDKQVSEAQSDLHYVRFDLTKAHWKV
VGLDHGREVLFLYDHTLLDGMSGSFACRQLVKSIEEYRQGKRSDDNKIQVSQKELPPPVE
KQITVSAPVSRLVKELANEYLFSKPKTSLPPQVLPWTGYYGVIDMTTEQTSAFLKMCKAH
SISGGAGLYGLLVCSSSKVLHDKYPDAVQQQVSGSIPWNARKFTPGQDPERLGMVVGESL
FDNPVPKPADVEFGSGPTIPSGFLEVAKVYQDQIKKDGVSTWFSGYPFMHIIGLIPFVDL
EDYFASHTNNYQRHGMYSLSNLTALETSTTVERLRFSQCTGGTCPFIQFSTVGIKGGPIS
ISVAVAEDDSIVPQVEKYVEEFLSHIS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG