YALI0F18722g

Overview

Description similar to uniprot|P36091 Saccharomyces cerevisiae YKL046C DCW1 Putative mannosidase; GPI-anchored membrane protein required for cell wall biosynthesis in bud formation
Locus type CDS
Locus tag YALI0F18722g

Location

Species Yarrowia lipolytica Positions 2498651..2500205
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1555 (nuc.)
Previous locus YALI0F18700g Next locus YALI0F18744g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18722g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18722gYALI0F18722g_mRNA-001YALI0F18722g_CDS-001

Nucleotide sequence

 

>YALI0F18722g
ATGCGGTTTGGTCTGATACCCGCAATTTTGAGCGCTCTGGCGTTCCTGCTGGGCACCGCC
CGAGCAGATCTCTCCTTTATGGATCTCAGTAAACCAGACACGGTCCATGAAGCACTCGCT
TTGGTGGCTGGAGGCCTCATGGACTACTACGATGGAACTCGACCCGGAGGAACCGTGGGC
ATGTTTGTCGCTCCTTACTACTGGTGGCACGCCGGCGCAGCATGGAACGCCTTCATCGAC
TACTGGCACATTACTGGAAACGACACCTACAACAACCTCACCTGGGCAGCCATGAAGCAC
CAGCGAGGCGAGAAATACGACCTCATGGTCTCCAACTTTTCTTCCTCCGAAGGTAACGAT
GACCAGGGAGTGTGGGCCATGACCATGATGACAGCTGCCGAGAAGAACTTCCCCGAGCCT
GGAGATGAGTACGGATGGCTGTACGTAGCCCAGGGTGCCTTCAACACCATGGCTGCCCGA
TGGGACACCCAGAGCTGCTACGGAGGTCTGCACTGGCAGATTTTCCAGTGGAACTCTGGT
TATGACTACAAGAACGCCATTGCCAACGGAGCACTGTTCAACCTCGGAGCCCGTCTCTAC
CGATACACCGGAAATGTGACCTATCTCGAGTGGGCCGAGCGAATCTGGGACTGGTCCACG
CAGATTGAGATTGTCGACAACGGCCGAGTTTACGACGGTATCCACTTGCCAAACTGTTCC
GACCGATCTCCCTACCTGTGGACCTACAACGCCGGTATTTACCTGTCTGGAGCAGCTGCT
CTCTACAACGCCACGGTGCTGCGAAATCACACGGACCCCAACCACGGTAAGTGGCTGGAC
CGAGCCAACGAGCTGTGGAACTCCACCAAGGGGCCCAACCTCTTCTTTGGCGGACCGCAG
AAGAACATTATGGTCGAGATTGCCTGCCAGCAGAAGACCATCACCTGCAACTCCGATCAG
CGAACCTTCAAGGGTATCTTCTCCTCGCTGCTCGGACAGACCGCCCAGATGGTGCCCACT
CTTGCATCCGACATCATGTGGTACCTGGAGGCCTCTGCCTACGCCGCCGCCCGAACCTGC
AGTGGAGGCCGAGACGGACACACATGCTCGCTCAACTGGCTCACCGGCCAGTACTCCAAC
GACTACATTGGACTAGGAGAACAGCTGAGTGCCATGGAGGTGATTCAGAACACCCAGGTG
CTCAAGTCCAGCGGACCTCTCACAGATATCACTGGTGGTACCTCAAAGGGTAACGGTAGT
GCCGGAGCTTTGGGATTCCATCCCTTTGGAGAGGATGAGGCTCATCCTCTCAATATTGGA
GGAGGAGACCGAGCTGGTGCCGCCATCATCACCGTCATTGTCGGTGTCATGATGATTGCC
GCCGGCTGGTGGTTGCTTGTGTAAGCGCACTACGCTTGTAGATATTGCCCATGGTGCGAT
TCAAGTTTGTAGAGCACATCCTATTTACGAATTTATGTTTTGATTTTGACCGCAATGCAA
ATACAGTCAGAGAGTACCGGTTGCCACTGTCAAATACAAGTACAATAGTCTCTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18722g_CDS-001

Protein length: 468 aa.
Product: Mannosidase, putative

>YALI0F18722g_CDS-001 MRFGLIPAILSALAFLLGTARADLSFMDLSKPDTVHEALALVAGGLMDYYDGTRPGGTVG
MFVAPYYWWHAGAAWNAFIDYWHITGNDTYNNLTWAAMKHQRGEKYDLMVSNFSSSEGND
DQGVWAMTMMTAAEKNFPEPGDEYGWLYVAQGAFNTMAARWDTQSCYGGLHWQIFQWNSG
YDYKNAIANGALFNLGARLYRYTGNVTYLEWAERIWDWSTQIEIVDNGRVYDGIHLPNCS
DRSPYLWTYNAGIYLSGAAALYNATVLRNHTDPNHGKWLDRANELWNSTKGPNLFFGGPQ
KNIMVEIACQQKTITCNSDQRTFKGIFSSLLGQTAQMVPTLASDIMWYLEASAYAAARTC
SGGRDGHTCSLNWLTGQYSNDYIGLGEQLSAMEVIQNTQVLKSSGPLTDITGGTSKGNGS
AGALGFHPFGEDEAHPLNIGGGDRAGAAIITVIVGVMMIAAGWWLLV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG