YALI0F18370g

Overview

Description some similarities with uniprot|Q12186 Saccharomyces cerevisiae YLR116w MSL5 branch point bridging protein
Locus type CDS
Locus tag YALI0F18370g

Location

Species Yarrowia lipolytica Positions 2441564..2443428
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1865 (nuc.)
Previous locus YALI0F18359g Next locus YALI0F18392g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18370g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18370gYALI0F18370g_mRNA-001YALI0F18370g_CDS-001

Nucleotide sequence

 

>YALI0F18370g
ATGTCCAGCACATACAGCTCGATACAACGACATCGCAAAGACACGTCGTCGTCGGGCTCT
AACACGACGCCGCTGGCCCGGCGCAGGCGGTTCGACGAGGGCCCGGCCGACCCGGGATCA
GCGCCACACCTCGACAGCTTTGTGGTGCCCCCCACCCGACACGACGATGGCACCAAACGG
CAGCCAGGACGACGCAAGCAGCGCTGGAGCCACGGCGAGAACAAGGTGGCAGACCTGCTG
CAGATGCCAACGGCCCTGACGGGCCACCTCACGCCCGAGCAGGCCGAAGCGTATGCCATC
TACTATCGCATTGAAGAGATCAGCCAGCAGCTGCGTCTGGGAGATATCGTGCCGCCGGAG
GACGAGCGGTCGCCGTCGCCACCGCCGCAGTATGATTCCATGGGCAAGCGAACCAACACA
CGGGATGCCCGATACACACGCCAGCTCGAAGAGGAGCGCCACCGGCTGATCGAGCGGGCC
CAGCGACTGATTCCCAACTACCGCCCGCCCGTGGACTACCATAAGCCCGCCAAGACCCAG
GAAGTTGTCTACATTCCCGTTAACGAGTACCCCGACATCAACTTTATCGGCCAGCTGCTG
GGAGCCAGAGGAAAGACGCTGAAGAAGATGGAGCAGGAATCAGGCGCCAAAATCTGCATT
CGAGGCAGAGGCAGTGTTAAGCAGGGCAAGGGACGAACAGACATCCCCTTCCAGTCCACT
GCCGAGGATGACCTTCACTGTCTGATCATCTCAGAGGACGAAGAGAAGATTGCTCGGGCA
GTCCAGCTGGTCCAGCAGGTCATCGATACTGCTGCTAGTGTTCCTGAGGGCCAGAACGAG
CTCAAGAGGTCTCAGCTGCGAGAACTGGCTGCTCTCAACGGTACTCTTCGAGATGACGAA
AACTATGGTGGCGCTCCCCAGTCGTCTTCTGGAGACGAGATGGACGACCGCAACAAGCGA
CGAAACAACTTCATGTCGTCTATTGTTTGCCATATTTGCGGCTCCAAGGGGCATTTCGCC
CGGGACTGTCTCGAGAAGGGCACCAACGCTGGCACGTCTGAGAATGCCGACAGAGAGTAC
GACGCTCTGATGCGAGAGCTCCAGGGAGAAGGAGTCATTGACACTGCCTCTCAGCAGCAG
TCCATTGCTCAGAACCCCAACACTAACAACGTGTCCAAGTTGCCCCCTGCTGTGACTGGC
TCCAACGCTGCTCCCATCAATATGCGAAAGCCCATGAGCGAGAGAGGAGGGTCGTTTGAT
AGATTTGACCGAGGCGGCTTCAACCAGTCCAACCAGCGAGAGCCCCAACAGCAGAGCCAC
CAGCAAAACATGCACAACACTAACGGAAACAACTATGACCGATACGACCGCAACTTCAAC
AACTCGTCCAACTCGTCGCCCGAACTCCCTCCTTGGCACAGACCCACACCTCCCTCGCAG
CCTGCTGCTCCCCCGTGGCTGCGACGTGACAACTACAAAAAGCACGACAAGGTATCTGTC
CAGCAGTCGATGCAGCAGTCGCCGTGGAATCGCGACACCCGTCAGCACCAGCATCAGCAC
CAGCCCCCCGTGCACCACCAGTCTATGTTTAATAACAACCAGTCTCCCATCGGGCCCCCT
GGTATGTCGTCTTCTGGCTTTGGTGGTTACGGTGGCGCTCCTGCTGGTGTGCCCGGCATG
TCTGTGCCTCCCGGACCTCCTGGTCTTTCTAAAGTTCCTCCTCCCCCTCCTCCTCCTGGG
GTGCCTGGAATGGATGGAGACCAGCCCATTCGTCATCCCCCGCCTCCTCCTCCCGGAGTT
ATCGGGCCCCCAAAATAAAAAAACTACTAACATGTATACTAATGGATTTGGATCTTAGAC
TCGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18370g_CDS-001

Protein length: 606 aa.
Product: Conserved hypothetical protein

>YALI0F18370g_CDS-001 MSSTYSSIQRHRKDTSSSGSNTTPLARRRRFDEGPADPGSAPHLDSFVVPPTRHDDGTKR
QPGRRKQRWSHGENKVADLLQMPTALTGHLTPEQAEAYAIYYRIEEISQQLRLGDIVPPE
DERSPSPPPQYDSMGKRTNTRDARYTRQLEEERHRLIERAQRLIPNYRPPVDYHKPAKTQ
EVVYIPVNEYPDINFIGQLLGARGKTLKKMEQESGAKICIRGRGSVKQGKGRTDIPFQST
AEDDLHCLIISEDEEKIARAVQLVQQVIDTAASVPEGQNELKRSQLRELAALNGTLRDDE
NYGGAPQSSSGDEMDDRNKRRNNFMSSIVCHICGSKGHFARDCLEKGTNAGTSENADREY
DALMRELQGEGVIDTASQQQSIAQNPNTNNVSKLPPAVTGSNAAPINMRKPMSERGGSFD
RFDRGGFNQSNQREPQQQSHQQNMHNTNGNNYDRYDRNFNNSSNSSPELPPWHRPTPPSQ
PAAPPWLRRDNYKKHDKVSVQQSMQQSPWNRDTRQHQHQHQPPVHHQSMFNNNQSPIGPP
GMSSSGFGGYGGAPAGVPGMSVPPGPPGLSKVPPPPPPPGVPGMDGDQPIRHPPPPPPGV
IGPPK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG