YALI0F17908g

Overview

Description some similarities with uniprot|Q01448 Saccharomyces cerevisiae YBR215w HPC2 cell cycle regulatory protein
Locus type CDS
Locus tag YALI0F17908g

Location

Species Yarrowia lipolytica Positions 2388821..2390312
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1492 (nuc.)
Previous locus YALI0F17897g Next locus YALI0F17930r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17908g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17908gYALI0F17908g_mRNA-001YALI0F17908g_CDS-001

Nucleotide sequence

 

>YALI0F17908g
ATGTCGGCCCCTCCCTCAGGCCATGCCCGCTCTCCAGGCATGTCCATCATGTCGCTGCTG
TCAGATGATAACAACTCCACCAACCAGACACCAGGAAGCCCATTAGCATACCAGCAATCG
CCTCCCCAACATCCACATCCGCATCAGCAGCCGGGCCCTCCGCCCCAGTATGCCACCACC
TTTAGCTACTCGCAGATTCAGCCCAGACAGGGCGACTACCCACTTCAGCAGCAGCAGCAG
CAACAGCAGCAGCACTATCCGCCTCCACAACAGCAGCAGCAAACATATCAGACCCAATAC
CAACAACCGCCATCGCAAGTGTCTCCTCCCGTCCGGGCGCAGCAACCACCTCAGCCTGCG
GCTCCTGCCCCTCCGTCCAAAACAGCTTCTAGTCCGGCTACCCCTGCTACACCTGCCACG
CCGGCAGCGGCACCAACTACGGCGGTGGGAAAGAAGGCGGGCAAGGCGGCATCCACAGCA
GCGACAGCAGCGGCAAAACCGACAGCTACCACGGCAGCAGGGAAACGGAAGAAGGCTGAC
GACCCAGCAGCGCCAAAGAAGGGAAAGAAGAAGCAAAAGAAGGATGATCAGACACAGCAG
TCGGTGGGATCCATTCCTATTGTCACTGGCTCCGACGACAAGGTGACGGCAAGGCCCAAG
GAAAATATTCCTCCTCCTCCTTCAGTGCCCATGTCGCCAGGCAAGAAACAGGCCCAGGGA
CTGGATGCCATTGGGCAGAACAAGGACGCCGGTCGAGGCTCCAAGCCGGAGGTGACTCTG
CGACTCCGAATCCGTCTGGCTGGAGGAAACGTCAAGGTCAAACCCTCACAGTCTGTTCTC
AAGAAGGCCGACAAGTCTGCTGCGTTGCCTGAACCCAAACAGTACGTGATTGATAACGAG
GAGTACGACTTTTACTCCACTCCAGACAAGGCCAATGACTGGACCGCATCAGCTGATGAT
ACCACTGTGCTCAACTTCACCCGATTGGCTGAGGACAAGTACGGATACGATCATGTGCAC
CCCAACCAGGCTCTTGATCTCGTGGACGACGATGGAGAGGTGGAGGACGACGACGAAGAG
GAAGAGGACAAGGACAAGGAAAAGGAAGAGAAGGAAATGAAACGGCGACAGCGAGTGGAG
GGTAAATACGATCTTAACGATCCCTTCATTGACGACACAGAGACTGCATGGGAAGAACAA
CAAGCATCAACTCAAGACGGCTTCTTCGTGTACTCCGGGCCACTAATTGAAGAAGCTCCC
AAGCCGGTGGAGACCAAGAAGCCTGCCAAGAAGCCTGGTCCCAAAAAGAAGACTCTGGCG
GCAAAGGAAACTGAATCCAAGAAGAAAACCACCCCTCTCGCCTCAGCTACTACATCATCC
ACAACCTCAACAACAGCTAGCGCTACAACCACTACCACCCCAGCAACAGTTGAGAAGAAA
GCATAACCAAGTATTATATCTTTAATATATAAAGAAATTTTTATTCTCAAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17908g_CDS-001

Protein length: 482 aa.
Product: Conserved hypothetical protein

>YALI0F17908g_CDS-001 MSAPPSGHARSPGMSIMSLLSDDNNSTNQTPGSPLAYQQSPPQHPHPHQQPGPPPQYATT
FSYSQIQPRQGDYPLQQQQQQQQQHYPPPQQQQQTYQTQYQQPPSQVSPPVRAQQPPQPA
APAPPSKTASSPATPATPATPAAAPTTAVGKKAGKAASTAATAAAKPTATTAAGKRKKAD
DPAAPKKGKKKQKKDDQTQQSVGSIPIVTGSDDKVTARPKENIPPPPSVPMSPGKKQAQG
LDAIGQNKDAGRGSKPEVTLRLRIRLAGGNVKVKPSQSVLKKADKSAALPEPKQYVIDNE
EYDFYSTPDKANDWTASADDTTVLNFTRLAEDKYGYDHVHPNQALDLVDDDGEVEDDDEE
EEDKDKEKEEKEMKRRQRVEGKYDLNDPFIDDTETAWEEQQASTQDGFFVYSGPLIEEAP
KPVETKKPAKKPGPKKKTLAAKETESKKKTTPLASATTSSTTSTTASATTTTTPATVEKK
A*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG