YALI0F17776g

Overview

Description weakly similar to uniprot|P32259 Saccharomyces cerevisiae YNL236w Global transcriptional regulator SIN4
Locus type CDS
Locus tag YALI0F17776g

Location

Species Yarrowia lipolytica Positions 2362271..2365085
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2815 (nuc.)
Previous locus YALI0F17754g Next locus YALI0F17798g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17776g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17776gYALI0F17776g_mRNA-001YALI0F17776g_CDS-001

Nucleotide sequence

 

>YALI0F17776g
ATGTACCAATATGCACCCTCCCACAACCTCGACCACATAGAGTGGAATCATGCACATCTG
ATTTACCCTCCCAACCTTGCAATACCTACATCACCAGTCAACCCCCCAGCTACGCAACTA
AATCAACCTGTGCAGATGACAATCGACTTTGACAGCATCATTGAGCCCAAGCTGGGCGCA
CGCGAGTCGATTTCGTGGAACAGAAACGGCATCATTGCCAGCATAGGCGACGAGGGCGTG
GAAACCAATTTGTTGGTGTGCACCGATGGCCAGGACTGGGTGCTGACCAAGCCGACGTTG
TACGCTCCCAAAAGCATCCTGCAACCCCCGACGACCTCGTTTGTGACTCCGCATCGCGCT
TTCTGCCATGTGGAGTGGTCTCCTTCGGGATCGGATCTCGCCATCATTGACACTCTGGGC
TCTCTATACATCTACAGTCAGTACACCACACTATCGCCCATCACATGCCTCAGAAAGCCG
CCATCCGAGGAACTGACGACTCCCATCGATCTCAACGCCATTGTAGGATTCACCTGGGTG
GCTCCTGAAAAGCCCGTCATCTTGACCAACCCGGGACTCAAAGCAGGAGGCAATGAAAAA
TCGAAACAAAAGCTGTCGGACGTGAAGGATTTCCCTACCGGCCAAACTTCGCAGCTGCTG
GGCTACTCCGGCATCAGCGTCACTTACGGAGTGAGTCAGGGACTGCATTTGGGACCCCGA
ATCCCTCAGGGCTTTGGAGCATGCATAGGAGTGACCAGATCGCAGGTGCTCAAGCTGTGG
ACCCAAAACGGCCCCTCGCAGCCATATAACCTCGTTAAGCTATCACTCAACCAGCTGCAT
TCCGACGACATCATTTCACATGCCAGTTTTGCAGGCACCAAAGACCACAAGATGCTGTTG
GCATGCTACTCGCCAGCAGGAGCCATCTACCTCTACAGAATCGAGGTGGAGTGGTCCAAG
GAGGAGGAACCTAAACTGAGAGCAACTCGACTGCTCAAGGAGACACTTATGCCGCAATCA
GGTGCCCCGGCGCGACTCACTGACCTCAAACTGTTCAGCATCCGGTCGAACCAAGTGTCG
TCAGAAACAGAGGCTGAAATGGTGTGCGTTTTCACGGATACAAAGGGAGCCACTACAAAC
AGATATGAACTGCAATCACATACACCGGATCTTAACTCGACCTTTTATTCACTCGGCACT
AACGACTCATCCGCCAGCTCAACTACAACGCACAAGACACACATTATCTCGCTGGTGGAG
ACCACCACCTCCAACAAGATTGTCAACATTGGCTCGCAAGTGTATGACTCCATCTTCTTC
GCTGCACACGAAGACGGCATTCTCAACTTTAGATACAGAGGCAATGTGTCTTCTTCGACA
AAGGGAACGCCTTTCAACATGTTCAGTGATGCTGGCTATGCTTTTACTCCTCTCCCCAAG
GGCTCAGATCGTCCTGATTACATTTGTGTATCGCCCACGTGTGCCTCCTACGTGTATAAG
ACGAAAGATGGACTGAAGCTACGAATCATTGACAACAAAATCCCCGATGCCGATCTCACA
GTTGCCCAGATGGTTGACTCCGCTTTTGTCCTTTCTCTTCGACACTCGGTTTCGTGCATT
TCTGCTGTCTGTAACGATGATGTCATGATGGTAATGCGACGAGAGATTCAGCGGGTTTCC
AAATTGGCTCCTGCTCTTGAGACACAGTTCCCGTTGCTACTTCTAGCTGAGTCACACAAG
GCTATCAACTTCTCGCTGGATCTCAAAAAGGACCACCAGATGGACAAAATTATGATCAAC
CCATCTCTCCAAAGACTCCTGACCATGCAGACGGTTATTGGAACACAGCACGGATGGACT
CGAAATGTCACCTCGCGTCTTTCGTGGTGTTTCCTCAACCTCCGTCTCGTCTCTTTCTCT
TTGACATTTACTCTACGAGCCATTGGACAGCAGAAGCCAGGCGTGGCCCCCAACCATGCC
ATGCGAATCCACTATCTCATGTCTCTATCTGGTCTTAAGCGATGGTGTCTTGATTTCGCT
GCCTATCTCTGCCAGGAGCTGTTGGCTGCCTCCAACGAAGGCCCTAGTTACTTCCAGAAA
CAGCATGTGGCTTTACCCATGGTCATGGCGCGTTCTTCTAGAATGTTGCTCATGTACTCG
TGGCGAGGCATTCGATCGCTAGACACGATCCTGATGCAAAAGCCTGGAACGGAGACGCAA
GAGGCAGGCCTGGCGTCCCAGCGACAACGGGAACTATCGCACTTCACACCCATCTCCATG
ACATTCTTTGAGCAGCTTTTCAACGTTATTGATTCACACACGAAGCAGGTCGCCGAAAAC
GTGGAGGACCGTTTGGGGCTAGAGCAGCAGCTCCTGTTCCAGGGAATGATCCCCCAGCAG
TTCTTGCCGCTGGCCAAACGGTGTGTTGATGAGTTTGACAAGTTCCGAAAGACAAATGAT
CTGTCGCCGTTGTACTTTTACAATGTGTCGTGGCTCGGCCTTGACGAACACTACGACGGC
CGTCCGGCCCCAACACCTGCCATGGCTCCCTACAGGAACGTGACGTCCACGGGTCTGAAG
ATTGACTGTCTGCGAAAGTTCATTATCGAGCGACAGGAGGGAAGCATCTTGCGGGTGTGT
CAGCGATGTGCTGGAACGTCAGTGTTTGTGGACTCATCTGACGGCAAGCAGTTCACTGGC
ACACATTGGACGTTTGCTTTCCAACGAAACTGTTGGTGCGGAGGCATGTGGATTCCCGAA
AGCTTGGGTGTTTGATCTCAGCACCAGTATTTAATTAACGATGTTTGCATACACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17776g_CDS-001

Protein length: 925 aa.
Product: Conserved hypothetical protein

>YALI0F17776g_CDS-001 MYQYAPSHNLDHIEWNHAHLIYPPNLAIPTSPVNPPATQLNQPVQMTIDFDSIIEPKLGA
RESISWNRNGIIASIGDEGVETNLLVCTDGQDWVLTKPTLYAPKSILQPPTTSFVTPHRA
FCHVEWSPSGSDLAIIDTLGSLYIYSQYTTLSPITCLRKPPSEELTTPIDLNAIVGFTWV
APEKPVILTNPGLKAGGNEKSKQKLSDVKDFPTGQTSQLLGYSGISVTYGVSQGLHLGPR
IPQGFGACIGVTRSQVLKLWTQNGPSQPYNLVKLSLNQLHSDDIISHASFAGTKDHKMLL
ACYSPAGAIYLYRIEVEWSKEEEPKLRATRLLKETLMPQSGAPARLTDLKLFSIRSNQVS
SETEAEMVCVFTDTKGATTNRYELQSHTPDLNSTFYSLGTNDSSASSTTTHKTHIISLVE
TTTSNKIVNIGSQVYDSIFFAAHEDGILNFRYRGNVSSSTKGTPFNMFSDAGYAFTPLPK
GSDRPDYICVSPTCASYVYKTKDGLKLRIIDNKIPDADLTVAQMVDSAFVLSLRHSVSCI
SAVCNDDVMMVMRREIQRVSKLAPALETQFPLLLLAESHKAINFSLDLKKDHQMDKIMIN
PSLQRLLTMQTVIGTQHGWTRNVTSRLSWCFLNLRLVSFSLTFTLRAIGQQKPGVAPNHA
MRIHYLMSLSGLKRWCLDFAAYLCQELLAASNEGPSYFQKQHVALPMVMARSSRMLLMYS
WRGIRSLDTILMQKPGTETQEAGLASQRQRELSHFTPISMTFFEQLFNVIDSHTKQVAEN
VEDRLGLEQQLLFQGMIPQQFLPLAKRCVDEFDKFRKTNDLSPLYFYNVSWLGLDEHYDG
RPAPTPAMAPYRNVTSTGLKIDCLRKFIIERQEGSILRVCQRCAGTSVFVDSSDGKQFTG
THWTFAFQRNCWCGGMWIPESLGV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG