YALI0F17688g

Overview

Description similar to uniprot|Q3E7C1 Saccharomyces cerevisiae YDR079C-A TFB5 Component of RNA polymerase II general transcription factor TFIIH
Locus type CDS
Locus tag YALI0F17688g

Location

Species Yarrowia lipolytica Positions 2352700..2353065
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 366 (nuc.)
Previous locus YALI0F17666g Next locus YALI0F17710g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17688g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17688gYALI0F17688g_mRNA-001YALI0F17688g_CDS-001

Nucleotide sequence

 

>YALI0F17688g
ATGCCAAAGGCCACCAGAGGTGAGTAGGGAGAATTCGACAGCGGAAAAAACCAGCCGGTG
AGCAGACAACTAACGCAGGCGTTCTGATTGAATGCGATCCCTCCATCAAGGCGCTCATCG
TCAACATTGACTCGTCGCAACACAACATCATTTTGGACGAGCTGGATGACACCCATCTCA
TGATCCACCCCTCCATGGTCGAGGTGGTCAAACAGAAGCTCAACAAGATGCTGGCCGAAA
ACACATACAACCCCAACGAGGAGGCTGCCAAAGCGACTGGAAAGTAGACAGTCGACGGAT
TATTTATTCAATAAAATTGCAGAGAAAGTGGATGGACCGTTCCTACTCTACACACTGCCT
TGCAGT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F17688g_CDS-001

Protein length: 76 aa.
Product: Component of RNA polymerase II general transcription factor TFIIH, putative

>YALI0F17688g_CDS-001 MPKATRGVLIECDPSIKALIVNIDSSQHNIILDELDDTHLMIHPSMVEVVKQKLNKMLAE
NTYNPNEEAAKATGK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG