YALI0F17578g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F17578g

Location

Species Yarrowia lipolytica Positions 2343400..2344679
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1280 (nuc.)
Previous locus YALI0F17556g Next locus YALI0F17600g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17578g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17578gYALI0F17578g_mRNA-001YALI0F17578g_CDS-001

Nucleotide sequence

 

>YALI0F17578g
ATGTTCCCCTACAAAACCAACCGACGCGGCAGCCGTTCAGGTGACCGCGAAGAAAACCCG
TTCGCAAACACCCAAATGTCGCGGTCCAGAAGCTCATCTCTGTATGGTGGAGGAGCACCA
CGTCCAAACACATCTCACGGGCACAGACCACAGACAGCAGGTCGTCCACACACGTCGCAT
ACCCACTCGACCAGCGTCAACTCATTTCCAGCCTTCAACAACGGATACATGGGCGGTCTT
GGATCGGGGTCCCCTGCAGGTGGTAAGCCAGCGTACAAGAGCCATCATCGCTCGTCCACG
TTGCGGGACGTGCGTGATTTGGAGCCCGAGACTATTGAGCCTCCCTCTTCGGCGTGGTCG
GCGTTAGGAGCTCTCAGAGAACGTATCAGACGTCTCAACATGGAGTCTGAGATGGAGGGA
GATGATGAGAACTCCGAAGACTCGGCAGGCACCGAAACGGAACAGGAGGGAGTCTCCAGA
GCAGATGGAGACACGTCGTTTGCATCAAACGAGTCCAGCGAATCGTGCGAGTCCATAGAG
TCGGAAATGGAGCATCAGAGAGCCCATATACAACAACCTCTGCAAACTCAACACACTGGG
CAGTCCACTATGTCCAACTTTGATCACTCGGAGGACATGATTGACATTGAAATGTCGCTG
AACCGATTGAAGAATTTGGATGCAGATCTCTACGAGTCCTTGTATACCATGTACGAGGAG
ATGACTGCCCTGTGCCACTTACCAGGCCAATCTGGCCTCTCAGAAGGCATCTCAAACAAT
TTAGTGGCTCTTTCCTCCTTCGTCAAGATCCTCGAGAAGAAACTAGAGATCCATGCCATC
AAGAGAACCAACCGAAGAAGTGTCATTGGTGTTGTTAGTCCTCAGGGATACAGCTCTAGC
AGCCCCTACCAGAGTCCCTACACCCAACAACAGATACCGCCGTCTCAACAACAGCAGTAT
GCTCCTCAATTCGTGCAGCCCCCCCCACAACATCCGACCACTCCCCGGATGCCCCGGTCG
TCGTCGTTGAGATCTGTTACTCCAGCCACGCCCTCAGAACTCGGAACTCCTAGCTACGCT
AGACGCCTTGCTGCCCACAATAGACGGCAGAAGAGCATGAGCATGAGCCCAGACTTTTAA
CGAAGGAGTAGTGGGTGCTTAAAACGAGATCAAGAGGTGATAAAAAAACGGGACTCTGGT
ATGCCTAGCCGTAGCTATCCAATGACGGCGTTCATACCAACATGTAGAATAATTTATTAG
TAATGTACAACCACCTGGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17578g_CDS-001

Protein length: 380 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F17578g_CDS-001 MFPYKTNRRGSRSGDREENPFANTQMSRSRSSSLYGGGAPRPNTSHGHRPQTAGRPHTSH
THSTSVNSFPAFNNGYMGGLGSGSPAGGKPAYKSHHRSSTLRDVRDLEPETIEPPSSAWS
ALGALRERIRRLNMESEMEGDDENSEDSAGTETEQEGVSRADGDTSFASNESSESCESIE
SEMEHQRAHIQQPLQTQHTGQSTMSNFDHSEDMIDIEMSLNRLKNLDADLYESLYTMYEE
MTALCHLPGQSGLSEGISNNLVALSSFVKILEKKLEIHAIKRTNRRSVIGVVSPQGYSSS
SPYQSPYTQQQIPPSQQQQYAPQFVQPPPQHPTTPRMPRSSSLRSVTPATPSELGTPSYA
RRLAAHNRRQKSMSMSPDF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG