YALI0F17534g

Overview

Description highly similar to uniprot|P27999 Saccharomyces cerevisiae RPB9 SHI1 SSU73 YGL070C RNA polymerase II subunit B12.6
Locus type CDS
Locus tag YALI0F17534g

Location

Species Yarrowia lipolytica Positions 2341623..2342085
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 463 (nuc.)
Previous locus YALI0F17512g Next locus YALI0F17556g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17534g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17534gYALI0F17534g_mRNA-001YALI0F17534g_CDS-001

Nucleotide sequence

 

>YALI0F17534g
ATGACGTCGCGATTTTGTCTCGAGTGGTGAGTGATCAGAGAGAACAAGAGAACGAGAGGA
CGAGAATGATCGAGGACCAGCGCTAACCCAGCAACAACATGCTCTATCCGAGAGAGGATA
AGGAGGATAGAAAGCTGCTGTTTGCATGCCGAAACTGTCCGTACACGGAGTTTGCATCCA
CTCCTCTGGTGTTCAAGCATCAGCTGATCACCAACATTGAGGAGACGGCCGGAGTGACAA
CCGGTATTGGAGCAGATCCCACTCTGCCTCGATCCGACAAGGAGTGTCCCAAGTGTCACG
AGCACGATGTGGTCTTCTTCCAGTCGCAACAGAAGCGTGCGGAGACCACCATGATTCTGT
TTTTTGTCTGCAACAACTGCAACAACATTTTCCGGTCTTAGAGGGGATTATTCGAGGGTT
GTATATTATTGGTTCGTTAATGGATTATTTATGTTTTGACGTG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F17534g_CDS-001

Protein length: 112 aa.
Product: RNA polymerase II subunit B12.6, putative

>YALI0F17534g_CDS-001 MTSRFCLECNNMLYPREDKEDRKLLFACRNCPYTEFASTPLVFKHQLITNIEETAGVTTG
IGADPTLPRSDKECPKCHEHDVVFFQSQQKRAETTMILFFVCNNCNNIFRS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG