YALI0F17468g

Overview

Description weakly similar to uniprot|Q6BPI9 Debaryomyces hansenii DEHA2E13266p
Locus type CDS
Locus tag YALI0F17468g

Location

Species Yarrowia lipolytica Positions 2332587..2336074
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3488 (nuc.)
Previous locus YALI0F17446g Next locus YALI0F17490g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17468g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17468gYALI0F17468g_mRNA-001YALI0F17468g_CDS-001

Nucleotide sequence

 

>YALI0F17468g
ATGAACGACTTTGAAGACGACCAGAAACATAAGGCAAGAACCGAGCCCTCGGGCCAGCCG
CCCAAGAAACGGTCAAGAGTCACATTTTCGTGTCTTATTTGCCGTAAACGAAAGATGAAG
TGCGACCGCAATCTGCCGTGCTCCACCTGCAAGGCCGCCAACGCCGCCCATCTCTGTCGC
TATGACATGAACCGCAGCGCGTCGCCCCAGGACAGAGACATGCCCATCCCCAGCGACGAG
TCCATGGTGGCACCAACGAGCGCTCCTGGAGGAGGAAGCGCGGCCAACTCGGGCTCCAAG
AAGCCCCGTGGCCGGCCCAAGAAGTCTGTCGCCGAGCTCACCAAGATGCACCAGCAACTG
CTGGAACAGAACGAGCTCAAGGGCGAGACCAAAGAGCTGAAGGACGTGGTCAAGCAGGAG
TTCCAGTCTCTTCCTCCCCAGCAACAGCAACACATCCCCCAACAGCAGCAGCAGCAGCAG
CACCAACAGCAACAAACCATGCGACATGTCCCCCAGCAACAGCAACAGCACATGCCCCAG
CAAGCACATCAACAACAGCAGTTCCACGCGCTCAACCAACATCAACACCAGCACCTGCAA
CAGCAGCACCACGCTCAGCAGCATCACAAGCCCAACGGCCTAACCATCAATACAAACGAC
CCTGCTACGCCCGTCAACCAAGCGGTGCGAAAATCGTCCGCAGCCTCAGCCACTCCGGGC
AGAACGCCCCCCAACGAAAACTCGCCTCGACGTGGATCGGCCAAGAAACACCTGCCGCCG
ATCGGAGATACGCCCTCACCGTCCATGTCGTCGCCGTCCTCCGCATTCAAATCGTCGGCT
GACATGCTGCACCAGGTGGTCACCCGGACCGCCACAGACACCAAATATATTGGCATTTCG
TCGAAATTCTCGCTGTGCATGAAGCCCGCGCGCCAGCAGTTGTTTGGACCCTTCTCGTCC
ATGTCCTTCTTTTCGGAAAACGAGCACCTGCAGCGGTTCTCCAAACAGGTGTACGAGGCC
AAGAAACAAAACTACATCAAGGACAAGAACGCACCTGTGCTTATGCGCCACAAAAACATA
TTTACCGACTTGCCGCAAAAGTACCGGGTCGGCCGAGGCTCGTTTGTAGGGGCTGGCAGC
CATTACGGAGGCACCAGTGCGCCGGGAAGCACAAACAGCCACGCCAATGGCGGCGGTGCT
TTCAATGCGGCTGCGTCGCCCATGGACAAGACTCCGGCCTCCACCTCGTCATCTTGCTCG
ACCATGGACTGTGGAGACATTTCCAAGTCTTTCCCATTTGACTCGCCGAACGGTATCTAC
GAGGTACTGGAGCTAGTCCCTCCCAAGCCCCTGACGTACTTTCTGGTCGACAAGTATATG
AACTCGGTCAACCGGTTCTTCTACACGGTCATTCCCAAATCCTTCTACGAGTGTCTCGAC
GAGTTTTTCATCCAGAAGCAGCGCATTCTGAACCGAGAGATCCCCGCCACTGTCAAGACT
GTCGATCTGCGACAGGTGGCCCAGATTTTGCTGATTCTGCGTCTGGCTCGAATTACGCTC
CCTTTTGACTGGGTGGTTCCCGAGTACCTGGTAGGTGGCAACTCTAACAGCACAACTGGC
GGTTCAAACAATGACGGCTCCTCCGCCTCGTCTCCTCCTGCCTCGGCAGACACCTCGGAC
GTGTACCTTGGAGCCGGGCTTTCTCAGATTGCCGAAAACTGCCTCAACCACATCGGCTAT
CTGCGAAAGGCCAACCTGCGGGTACTCCAGGTGCTATGTTTGCTCAAAATCACGGCCATG
TGCGATCCCGACGCCGGCGACTCGGCCGACGGCTGCGACTCGTGCAACCTCACCGGTCTG
ATCATCCAGATCTCAATCTCTATGGGGCTGCATATGGACCCCAGCCACTTCTCCAAGGTG
TCCCCAACCATTGCTCATCTGTGGAGAATGCTGTTTGGTTTCATTGTCACTCTGGACGCC
CATCGATCCATGGAGCTGGCTCTGCCTCCCTCTCTGCCTCTGGAGTGTTCGGATACCGAC
ATTCTGTTCGAGCGACACTCTCTGCCCGATGACCTGCTGTCACCCGGCGAGGAGCAGCAC
ATTTACCATCGACGAAAGCAGCTGCGATGGGCCTTCATTTCTCTAGATGTGGTTCGGGGA
CTGCTGCGAACAACAGTGCATGTTACTCCCGATGGAATGGGCACCTCTCCACAGGCCATG
GGCAAGGAGTACTTCGATGCCATTGAGCGCAAGCTGGAAGCATTTGAGAACGACATGAAC
CCTTACTACGAGGAGATCCTGTCGGCTCTACAGGCACCCGAGTCCCGAGACAGCGACTAC
CGCACCGTGGACGGCCATGCTGCCGCCCAGCGGCTGTCTCTGTACATGACACTAGTGCGT
CTCCGTCTTGGCTACTACCTGTGTGCCGGCAACTTTATGGACGCCGCCGAGGTCAAGACC
AAGGTGGTTACGTGTGCTCTTAAGATGTGCGATATCATGCAGGCTGCTATGGAGCGACCT
CATCTCTTCTCTGGGTTCATGTGGTATGTGCATTTCGTCAACCTGCGAAACTTCACCTTC
TCGTTTGGTACTTGCATTTCTGCATACCTGAACGAGATCAACACTCGACGAGCCGAGCGC
GACATGCCCATCATTACTCCTGCCGTCAACCGAAAGTACAATGACATGACGTTTGACTAT
TCGCCCGACAAGATCCGAGATCCCAAGCGGTTGATTCAGGCTGCCATCAGAACTCACCGA
TGGGTCCGATCTCTTTCGCAGCGGTACTATGTTGCCTGGAAGTGTCATGCCGTCATTGTC
GGTCTTCTTCGAGGTGCTCGTCTGGAGGTTCTCGCCCAGTACATTGACGCTCAAGAGTAC
AAGCGGCTGGAGAAGGAGGGCCACCGGGACAACACGTTTGTGGGTCCTTACGCGCCTCAA
ATGCGAGAGCCCACAACCATGTCGGTTACCAAAAACGACTGGGGTCGAGACATCACGTCG
GAGAACTACGACCGAGAGCAGAGCGAACTTCGAGCTGCCGAGGAGCGTGCCAACCGCCAA
GGTCAAGGCCCGGAGTCTATGTCTGCTCCTGCAGCGCAGTCTCAGGACCAGATTGGCCAG
GGCAACCAGCAGCAGCAGATGGAGTGGCAGGGTGACAACAACATGTTTCAGAACAACGGT
CTGATGGAGCCTCCCTTTCTAGAGGACCCGATCATTGACGACCCCACCTTTGATACCCTG
GGCTCGACTCTGGGGCTTCCGTCGCTTATTGCCGAAGAGTGGGCCAACATTGAGGACTCG
CTCTTTGATGATCTTAACTCGTCGCGGTTCTACATGTCCATGGACCAGAATTTTAACAAC
ACCTCCACCGCCACTGACAACTATGAGGTAACTTCGCCCTCCAGATAGTCGGATTCTTCT
AGTTGATTGGTGGTTATTTATTTGTACAGTAATGTGATAATAGACAATTGAACATGTTAT
TGTATTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17468g_CDS-001

Protein length: 1136 aa.
Product: Conserved hypothetical protein

>YALI0F17468g_CDS-001 MNDFEDDQKHKARTEPSGQPPKKRSRVTFSCLICRKRKMKCDRNLPCSTCKAANAAHLCR
YDMNRSASPQDRDMPIPSDESMVAPTSAPGGGSAANSGSKKPRGRPKKSVAELTKMHQQL
LEQNELKGETKELKDVVKQEFQSLPPQQQQHIPQQQQQQQHQQQQTMRHVPQQQQQHMPQ
QAHQQQQFHALNQHQHQHLQQQHHAQQHHKPNGLTINTNDPATPVNQAVRKSSAASATPG
RTPPNENSPRRGSAKKHLPPIGDTPSPSMSSPSSAFKSSADMLHQVVTRTATDTKYIGIS
SKFSLCMKPARQQLFGPFSSMSFFSENEHLQRFSKQVYEAKKQNYIKDKNAPVLMRHKNI
FTDLPQKYRVGRGSFVGAGSHYGGTSAPGSTNSHANGGGAFNAAASPMDKTPASTSSSCS
TMDCGDISKSFPFDSPNGIYEVLELVPPKPLTYFLVDKYMNSVNRFFYTVIPKSFYECLD
EFFIQKQRILNREIPATVKTVDLRQVAQILLILRLARITLPFDWVVPEYLVGGNSNSTTG
GSNNDGSSASSPPASADTSDVYLGAGLSQIAENCLNHIGYLRKANLRVLQVLCLLKITAM
CDPDAGDSADGCDSCNLTGLIIQISISMGLHMDPSHFSKVSPTIAHLWRMLFGFIVTLDA
HRSMELALPPSLPLECSDTDILFERHSLPDDLLSPGEEQHIYHRRKQLRWAFISLDVVRG
LLRTTVHVTPDGMGTSPQAMGKEYFDAIERKLEAFENDMNPYYEEILSALQAPESRDSDY
RTVDGHAAAQRLSLYMTLVRLRLGYYLCAGNFMDAAEVKTKVVTCALKMCDIMQAAMERP
HLFSGFMWYVHFVNLRNFTFSFGTCISAYLNEINTRRAERDMPIITPAVNRKYNDMTFDY
SPDKIRDPKRLIQAAIRTHRWVRSLSQRYYVAWKCHAVIVGLLRGARLEVLAQYIDAQEY
KRLEKEGHRDNTFVGPYAPQMREPTTMSVTKNDWGRDITSENYDREQSELRAAEERANRQ
GQGPESMSAPAAQSQDQIGQGNQQQQMEWQGDNNMFQNNGLMEPPFLEDPIIDDPTFDTL
GSTLGLPSLIAEEWANIEDSLFDDLNSSRFYMSMDQNFNNTSTATDNYEVTSPSR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG