YALI0F17358g

Overview

Description similar to uniprot|Q04373 Saccharomyces cerevisiae YDR496c
Locus type CDS
Locus tag YALI0F17358g

Location

Species Yarrowia lipolytica Positions 2316469..2318482
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2014 (nuc.)
Previous locus YALI0F17336g Next locus YALI0F17380g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17358g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17358gYALI0F17358g_mRNA-001YALI0F17358g_CDS-001

Nucleotide sequence

 

>YALI0F17358g
ATGGGTTCTGCTAAACGATCAGCTGACAGTCGAGAGAAGACGGTGTCCAAGAAGGTCAAA
CTGGTGGAGAAGTCCACTGGCAAGAAGGGCGCCAAGAAGGTGGTCGAGGAGGTCGAAGAG
GCTTCTTCCGAGGAGGATTTTGCATCTACTGATGAGGAACAGGATCAGGAGGAGGACTCC
GATGACTCCGATTCTGACGACATGGAGATGAGCGACAGCGACGAGGAGAAGGAGGAAGAT
GACGAAGAGGACGCTCTTGACGACGACGAGGAGGATGAGGAGACCAAGGAGGACGGAGAG
GAGGCCCCTGCCGGCAAGTCTAGTGCTGCCGAGAGCCATGCTGAGCAGAAGCGCCTGTTG
AAGGAACGAAAGCTTGCTCGATCTGGAGGAGAGAGTATCGCTCAGATCAAGCAGATTTGG
GAGCGGCTCCGAATGAAGACTGGTGTCAAGCCTGCTGAGCGAAAGCAGCTGGTGGAGGAT
ATCTGGGCCATTTCCAAGAACGATATCAAGAACTTGATTCTCAAGCACGACGCATCGCGA
ATTATCCAGACTCTGTTCAAGTACGCTGACAAGGAGAAGCGAGAGATCATCACAAAGGCG
CTGAAGGGCAACTACTACGACCTGGCCATCTCGTCTTACGGAAAGTACCTGCTGGTCAAG
ATGCTGCATTACGGATCTGCTGCCGTTCGACAATCTATTATTGACGAGCTGCACGGCCGG
TTCCGAAAGCTCATGCGTCATAAGGAGGGTGCCTATGTGTTGGAGGATGCCTACAGAGAC
TACAGCACTGCTGCTCAGAAGCGACAAATCATCCAAGAGTTTTTCGGTGCCGAGTTTGCC
GTTTTCCGAGACGCTGCTGGCACAAAGACCCTTAAGGATATTATCGAGGACGCCCCCGAG
AAGCGACCCATCATCATGCGAAACCTGAACGAAACTATCACTGCTGCTGTCAACAAGGGT
TCCATTGGTTTCACCGTCATTCATGCTGCCATGCTTGAGTACGTCAGCAACCTTGACACC
AACAACTCGGAGAAGACCGAATTCATCGATCTGATTGGCGAGCAGTTTGCAGAGATGGTG
CATACTAACGAGGGATCGCAGGTGGCTTGCAAGACTCTGGCCATGGCTTCTGCCAAGGAG
AAGAAGGGTCTTCTCAAGTCGCTCAAGAGCTTTGCCGACACCCTGGCTGCTGATCAGTAC
GGACACATGGTCATGATGACTGCTTTTGACACCATTGACGATACCAAGAGTGTTGTTAAG
GCCTTTTCTGGTGAGCTCTCCGAGAAGCCCGTGCATGAGCTGTTCATGGACAAGAACGGT
CGACGACCCTTCCTGTATGCCATGCTAGGCCGAGACTCTCGATACTTCAACAAGCTGGTT
CTGGATCAGCTCAAGCAGTACGATGAGATGAAGACTGCAACTGGTACTGCCAAGAAGGAT
GATGCTCTTCGACTGGAGGAGATCAACAAGGGAATGTCCCCTCTGATTCTCGAGGCCATT
GCCAACAACGCTTACGAGCTCATGAACGACACCCTGGGTTCTCAGTTCATTTCCGAGGCT
CTTCTGTCGTGTGACGGTGACAAGTCTGAGGCTATCGCTGCTCTTATGGAGGTTCTGTCT
GCCGATCCCGCCGGTGACAACCACGTCATCAAGCAGCCCAACGCTCAGCGAGCTCTGCGA
ACCCTCATTCAACAGGGACATTGGAACAACAAGGAGAAGAAGGTAGTCAAGGTCGAGACT
CCCATCGACTTCGGTGCCAAGTTCTACGATGCAATTGGGGATCACGTTGTCGCATGGGCC
ACTGGAGACGGTGCTTTTGTCATTGTGACTCTGTTGGAGAACCTGGAGGACGATAAGCTG
AAGAAGGAGCTCAAAAAGACTCTCAAGGACAGTAAGAAGGAGATTGCTGCTGCTGCCGAG
GATGGAAACAAGGGTTCCAAGCTCATTGTTGACCTGCTTTAAGCGAAAACACGTTGTATA
AAGATATATTTGGTAATAGAGGTATGATAGGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17358g_CDS-001

Protein length: 654 aa.
Product: Pumilio-homology domain protein, putative

>YALI0F17358g_CDS-001 MGSAKRSADSREKTVSKKVKLVEKSTGKKGAKKVVEEVEEASSEEDFASTDEEQDQEEDS
DDSDSDDMEMSDSDEEKEEDDEEDALDDDEEDEETKEDGEEAPAGKSSAAESHAEQKRLL
KERKLARSGGESIAQIKQIWERLRMKTGVKPAERKQLVEDIWAISKNDIKNLILKHDASR
IIQTLFKYADKEKREIITKALKGNYYDLAISSYGKYLLVKMLHYGSAAVRQSIIDELHGR
FRKLMRHKEGAYVLEDAYRDYSTAAQKRQIIQEFFGAEFAVFRDAAGTKTLKDIIEDAPE
KRPIIMRNLNETITAAVNKGSIGFTVIHAAMLEYVSNLDTNNSEKTEFIDLIGEQFAEMV
HTNEGSQVACKTLAMASAKEKKGLLKSLKSFADTLAADQYGHMVMMTAFDTIDDTKSVVK
AFSGELSEKPVHELFMDKNGRRPFLYAMLGRDSRYFNKLVLDQLKQYDEMKTATGTAKKD
DALRLEEINKGMSPLILEAIANNAYELMNDTLGSQFISEALLSCDGDKSEAIAALMEVLS
ADPAGDNHVIKQPNAQRALRTLIQQGHWNNKEKKVVKVETPIDFGAKFYDAIGDHVVAWA
TGDGAFVIVTLLENLEDDKLKKELKKTLKDSKKEIAAAAEDGNKGSKLIVDLL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG