YALI0F17072g

Overview

Description some similarities with uniprot|P13434 Saccharomyces cerevisiae YBL021c HAP3 CCAAT-binding factor subunit
Locus type CDS
Locus tag YALI0F17072g

Location

Species Yarrowia lipolytica Positions 2292232..2292909
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 678 (nuc.)
Previous locus YALI0F17050g Next locus YALI0F17094r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17072g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17072gYALI0F17072g_mRNA-001YALI0F17072g_CDS-001

Nucleotide sequence

 

>YALI0F17072g
ATGGCCGACTCGGACTCCAAGCCCTCCTCTGGCAACGAACTCGAACTTCGAGAGCAGGAC
AAGTGGCTGCCAATAGCCAATGTGGCCCGAATCATGAAGTCTGCGCTGCCCGAAAACGCC
AAGGTGTCCAAGGAAGCCAAGGAGTGCATGCAGGAGTGCGTGTCCGAGTTCATTTCCTTC
ATCACCTCGGAGGCGTCGGAGAAGTGCGCAGCCGAAAAGCGAAAGACAGTCAATGGCGAG
GACATTCTCTTTGCCATGCTGTCTCTGGGCTTTGAGAATTACGCCGAGGCCCTGAAGATT
TACCTCACCAAGTACCGTCAGAACCAAAACTACAAGCAGGAGAACAGAAGCGAGAATCGA
AAGAAGAAGACGCTGCCCGCCCAAGAAGGAGCTGTGGCTGCTGCTGCTACCGGTTCGAAC
CCCGTCACTGAGACAAACTCGCCTTCCCAGCAACAGCAGGAGGAGTACTACGCTGCCTAC
GACGTTCCAATTAACGGACAGGACCCTACCGAGCAGCGGTTCTCCGAAGAGCCCACCCAG
GACGAAAAGGCCATGTATGACGCTTATACCGGTGACTACTACTAAGTGTCTGATTGGAGA
CACATGCTACGGACCTTTCCCTTTGTACTATTGATGACTATTTATAAAGTGTATGTGATA
TATTATGACTGTATTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17072g_CDS-001

Protein length: 195 aa.
Product: Conserved hypothetical protein

>YALI0F17072g_CDS-001 MADSDSKPSSGNELELREQDKWLPIANVARIMKSALPENAKVSKEAKECMQECVSEFISF
ITSEASEKCAAEKRKTVNGEDILFAMLSLGFENYAEALKIYLTKYRQNQNYKQENRSENR
KKKTLPAQEGAVAAAATGSNPVTETNSPSQQQQEEYYAAYDVPINGQDPTEQRFSEEPTQ
DEKAMYDAYTGDYY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG