| Description | some similarities with uniprot|P23643 Saccharomyces cerevisiae YDR495c VPS3 vacuolar sorting protein |
|---|---|
| Locus type | CDS |
| Locus tag | YALI0F17006g |
| Species | Yarrowia lipolytica | Positions | 2285917..2289584 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Antisense |
| Chromosome | YALI0F | Total length | 3668 (nuc.) |
| Previous locus | YALI0F16984g | Next locus | YALI0F17028g |
Here is a representation of the structure of the locus YALI0F17006g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0F17006g
ATGACCTGCAACCCTATCTCGTCGGTTCAACAAAACACACTTCCAGTTGACCTGCTACAG
ACAGCACATCACGTCGCCGCGACCCTTCAAAACAAGGCCTCGATGGAAACACCGCCGTAT
CTCAAGGTGCAGACGCTGGCTCCAGACGTGCTGGAGGGCGCCACCATTACCTGCATTGAA
GCATGGGGTGAGTATGAGAGAGAGAGGAAGAATGTCAGCATATCGGCAATGGGATCACAC
ACTTCAGTGAGGCGAAGACGATTCTTTCAAACTCCGAAATCAAACGACACAAACACATTC
ATGTTTGCGGTACCTTCCACGTGTCTTTCCATAGTCCAAAGTGACTGCTGACATGGGTGT
CGAGTGCTGCTCGGTTCCCTGCGGGGTATCACACATTTCCTACGATGGATGAGTACAGTT
AAATTCCAATCATTTCCGTCTTCTAACACAGAAAACTCTCTCTATCTAGGTACTTCTGAT
GGAGAAGTTCTGCACTTCTTCTGTGTTCAGGACATTGAGGTCTCTTCTACCGACAGGGGA
CGTGAAATTGCACCACCACAGTACATCATTGCCAGCAGGCAAAAGGTGCATGCTACCCGA
ACCAGGACCGTCGACAAGATTGTGGTACTTCCCCAGATCTCCAGAGCTTTGGTTCTGTCC
AATTCCACTGTCTCCGTGTTCTCAGTGCCAGAGTTCGCTCCTGCCTCCGGCTTTGGCAAG
GTCAGAGATGTTCTGGACATGTGTGTAGATCAAGACATCACCAAAGCTCTTCTCAAAAAC
CCCACGGCAGCGGCATCTTCTGTCCACGTCACTACATTCACGAAAAACACTATACGAATC
GTCAATGTGTCTGCAAACGGCCTGAAGCTCGTCAAGGACGTGAGCTATGCAGAGGCTCTC
ACAGGAGTGCGTCGAGGCCGTCTTTGTCTCGTTGGTAATACCAAGACATATGATCTTGTG
GACGTTGAGAGAGTACGAAAAGTGCCCTTGTTTGAGGTGTGGAGTGGTGCCGACAGCGGA
GCAGATCTCAAGCCGCAGCCCGTCGCAGCCCTTGTCGGAGATTCCGAGTTTCTAGTTGCA
TGTGGAACTCAGAAGGGAGATCCTGCCATGGGTATGATCATCAACAGTGATGGAGACATT
TCGCGGGGTACCATTGCGTGGAACGATTATCCTACCTCGGTGGTTGTCGATTATCCTCTT
GTTGGCGCGGTTGTTGGTCAAAAAGTGTGTTTCCATAATGTCGTCAATCAGACAGAGGTC
TTGATTGGCGATGAAGTGGATGATAAGGTCAGCAAAGAGGAGAAGTCTGACGACAAGCAG
GAATGCAAGAAGGATAGCAATACCGACGGTGATAATGGAAACAAGGACAAGGGGGACAAG
AAGGACAAAAAGGACATGGAAGATGCCGAGGGTGAATCTGAAGAGGGCGAGGATAAGGGG
ACCGATAATGAAGCCGGGGAAGAAGCTAAAAAGCCAGAAGGGGCTTCGAAGGAAAATACC
GAGGCCACCGTGGAACCTGCCACCAAGGTAACCATCTCCAAGGTGCTCAAACAGTTCGAT
ATTCCGTTCCCAGAGATGGTGAACAAGTTGACACTGGTGGATGTCTACGCCAAGGACAAA
GGTGGCTCGAAGGATGACATTAAGGACATAGAAGAGTCTTCTCACTCTACCAAACTCTCT
TCTTGGTGCAAAACATCTTCAAACATCTTTACTTACTCTGACAAAGGAGTCTTCACATAC
ATCTCCACCCCTCGACTGTTTCATCTGGAGAATCTAGTCGAGCAGCAAAAGCTGGGAGAG
CTCTATATCGAATTGGAATCGTTCGGACATGGAGATAATGCCAATTCAGAGGCCGCCAAC
CGCCAAAAAGAGTATCTGCAACTCTTGGTATGTTTGTCGCACTTGTCTCATGACAGACAG
GCTGACTTCAAGCAAATATGGACCAACTCTTTCCACGATTACCTGTTGGATCTGAAGATT
CTCATGTACATTTTCTGTCCCAAGATTTTGGACAAGTTGGAGGTACCCAATGGTGTGGTT
ACTGCTCTTGATGTGTCCAAAAGCATGGTGGCTCCAGATGACAAGTCTGGGGACGTTGTT
TCACGAAAATGGTGGCATACTTGTTACGATATCTGCCAGTACCATCTGCGAGACCCCAAC
ACTGCTGATTTCAAGGGTAGATGGATGCTAGAGGTACTCCTGTGCCAGTTGCTGGTTTCC
GATTGTGCCAGCGACCTGTTAAAGGAGAATACGGCCGAAGATTCGTCTGATGTTGTCACA
GGTGCTATCATGCATCTTGTTGAGAGCCAGCTGGTGACCGACAAGGGCATTTCTGAGTCT
GCGGAGATTCTCAGGGAGCACAAGAAGTGGTACCCACTTTCGCTGCTCGATCTCCGTGTC
AACAAAATTGCCTCTGTCTGTGAAATCTGGCAGTCAATTCTTGCCGGTGACATTGAGGAG
CCCTTATTCACCAATGGCCCCAAGCGCCTTTCTGCGCTGCTCAAGACATGCTCAGACAAA
GAGTTGGTGCGTGCTTATGGACTCTGGCTTGTCGACAAGTTTCCTCAGGAAGGCGTGGCG
ATTTTTGTGGACCAGGACAGTTCGAATGCAGGCTCGAAAATCAAGTTTAACTCCAAGGAG
GACAAGGACAAGATCTCGACCGCCATCAAGGCCATGCAGAACCAGGTGGCTTGGAAATCT
TACCTTCAACAGATGTTATTCGTAGAGGGTGAGGTCAGTATGGTTGGGGAGTATGTTGGT
TTACTGATTGACGAGTGCATTGCTGACATCAAAGATGCCAAGGACTACGACGAGGATGAG
GTGTCAGCAGCGTACAGGGCTCTCAACCCCCCTAAGCGGTCGTACTTTGAGTTCCTCAAG
TCGAAGAAGGGCACCGACACCACCTTGGCCAGCCGTGTTGAGATCATTCGAATGATTGAC
CGGGGACTGTGTGGAGAGAAGAAGGAGAAGGGCGATGACAAGTCTCACAATGGCAAAAAA
TCTCGTGGAAAAGGTGTATTCGGGGACGCCAAGTGGCATTTTGATGTTAATTGGTCGTCG
TCCTTGACTCTCGAAGACTATCTTAGTTTTCAAGAGAAGCTCATTCCCTATCAAAACCAG
TTCTTGTTGGAGTTGGTCATTATTTATGGCCAGTTGGGTGACCATCAGAGATGCATTGAT
ATGCTGGTGCACGATCTCACTGACTATCAGACTGCGGTCGACTATTGTGCCAATGTTGAC
AATGTGGAGGGAAGTACACCTGCTGCGGATGAGATTCTCAAACGGTCTCTTTTTACTCAC
TTGTTCAAGCAGCTTCTCAAGATCACGTCTGACCAGGATACAAAAGTGTACTACTGTCGT
CACGTCATGGAGAAGTACGGCAACCATCTTGAAACCAAGTTTGTGCTCAACGCGGTGCCT
CCAAACTGGCCCATTGAGATTCTGAATGGGTACTTGAAGAATGTTTTGCGACAGCTGACC
AATGACAAGAACAAGAGTCTGATGATGAAGAGTTTGACTCGAAGTGAAAATGTCAGCATG
ACCAACGAGCTGACTGCGTTGACAAGAATTGATGCCGAGGTTAGAAGGGAGTAGGAGGGA
TGGAACATCAGCATATCAGTAATATGTAAAATAATGATTAATGATTTGAATGAATCTACC
AGTATAAC
Locus sequence
Up/downstream sequence
Protein length: 1110 aa.
Product: Conserved hypothetical protein
Browse the locus neighborhood with JBrowse:
ATG