YALI0F16753g - CHN1

Overview

Description uniprot|Q6C1F4 Yarrowia lipolytica YALI0F16753g CHN1 Hsp70 co-chaperone and U-box ubiquitin ligase
Locus type CDS
Gene name CHN1
Locus tag YALI0F16753g

Location

Species Yarrowia lipolytica Positions 2245649..2246698
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1050 (nuc.)
Previous locus YALI0F16731g Next locus YALI0F16775r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16753g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16753gYALI0F16753g_mRNA-001YALI0F16753g_CDS-001

Nucleotide sequence

 

>YALI0F16753g
ATGCCGACCGCCGAGGAGTTTAAGACGATCGGAAATGATTTCTACAGCAATCACGACTTT
GAAGCTGCCATTATGGTGAGTACGTCTGGCCCAGCCAGCAGAAGAGCCTTGTCAACAGAT
CATACAACTAACACAGAATTATTCTCAAGCGTGAGTCTGAGCAGGGATGAATATATGGTG
ATAGGTGACAGACACGGTCTCACCCACCCTGACTAACACAGAATCGTTAAAAACCCGAAA
AACGTCATATACTACCAAAATGTGAGTTGCAACAGACATATCCGCGACAGTTTCGATCCG
AGCTAACTCAGAGAGCGATGGCCTACTCAAAGCTAGGCAAGTACGAAGAGATGGAAAGAG
ATTGCTCAAAGGCATTGGAAATACTGCCCAACTCGGTCAAAGCATTGTACTACCTAGGTA
TCGCCTTGACAGCTCTGCGACGGTTTAGACAGGGCGCCGAGGTACTGGATAAAGCATACG
CCGAATCGGTAAAGATGTCGAGCGCTCTATCGCCCAAAATCTCCGAACAGATTTTGCTTC
TTAAGGAACAACGACACTCCCATGAACTCGAGTCTGTTCGGCGCCAGTCTGACACACTGT
TGACTTACATGCTGGAGCTGTTGGAAAAGGATAAACAGGAGCAGTTAAACGAGCTCAAAG
CACAGGGACTAAGTGGACAGGCACTCAGATCGGAACGTCAGTTTGTACAGGAGGAGTTCT
TGGATAAAGAGAAGCAGATCATCTCCACTTTCAAGGCCTCCCAAAAGGGATCTCAAAACG
GAAACTCAGCTATGGAAGAGATCCCCGATTACTTGGCGGACCCTATCTCATTCAATCTGT
TTATGGACCCTGTTGTGACACCCGCTGGACAGACTTACGAGCGAAGCTGGCTACTAGAGC
ATTTGAAGGGCGGTGGTAAAGACCCACTGACACGAAAGAACCTCAGCCCTAAGGACCTTT
ATCCCAACTTGGCTGTCAAAAAGGCAGCCGAGGACTTTATGAAGCGAAACGGCAAATACT
AATTAATGTATCTACATATGGACCATATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16753g_CDS-001

Protein length: 280 aa.
Product: Hsp70 co-chaperone and U-box ubiquitin ligase
Gene: CHN1

>YALI0F16753g_CDS-001 MPTAEEFKTIGNDFYSNHDFEAAIMNYSQAIVKNPKNVIYYQNRAMAYSKLGKYEEMERD
CSKALEILPNSVKALYYLGIALTALRRFRQGAEVLDKAYAESVKMSSALSPKISEQILLL
KEQRHSHELESVRRQSDTLLTYMLELLEKDKQEQLNELKAQGLSGQALRSERQFVQEEFL
DKEKQIISTFKASQKGSQNGNSAMEEIPDYLADPISFNLFMDPVVTPAGQTYERSWLLEH
LKGGGKDPLTRKNLSPKDLYPNLAVKKAAEDFMKRNGKY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG