YALI0F16709g

Overview

Description similar to uniprot|P11491 Saccharomyces cerevisiae YDR481c PHO8 repressible alkaline phosphatase vacuolar
Locus type CDS
Locus tag YALI0F16709g

Location

Species Yarrowia lipolytica Positions 2237628..2239587
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1960 (nuc.)
Previous locus YALI0F16687g Next locus YALI0F16725r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16709g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16709gYALI0F16709g_mRNA-001YALI0F16709g_CDS-001

Nucleotide sequence

 

>YALI0F16709g
ATGGATCAAAAAACCGACTCGCGCGAGTATCTCGACGGGTTCAAGGCCGGCCAGAAGGTG
GCGTACGAGCGGCTCTACTGGCGACGAATCCTCGTGCTGTTTGGAGGTCTGGCCATGGTG
CTGGGTTTCTTTGGCTATAAAGGATACGCTGTCAATGACGTACTTGACCTGGATCTGTCC
ATGTCGCGAGCCGACTCTGTCAACGACAATCCCCTTGTTTCTCCTCTGTCCAAGCCCAAG
AAAAACGTCATCTTCATGGTCACCGATGGTATGGGACCTGCTTCCGTTTCTCTGGCCCGA
ACCTACCGACAGTACGTCCAGGGACTGGCCTACAACAACACCCTGACCATCGACAAGCAC
TTTATTGGCTCGTCGCGAACCCGATCCAGTGACTCCCCCGTCACTGACTCTGCCGCTGGT
GCCACCGCCTTCTCCTGTGGTGCCAAGTCCTACAACGGAGCAATCTCCGTCACCCCCGAC
TATAAGGCCTGTGGCAGTGTTCTCGAAGCTGCCAAGCGACAAGGTCTCAAGACCGGACTG
GTGGTGACCACTCGGATCACCGACGCGACCCCTGCTTGTTTCGGAGCCCATGTTGCTCAC
CGGTCTCAGGAGGACGAGATTGCTGACCAGCTGCTGGGCTACGCTACTCCCCTCGGCCGT
TCTGTCGACTTGCTCATGGGTGGCGGACGAATCCATTTCACAACCAAGGGCCGACAGGAT
GGCCGTGATCTGATTGCTGAAGCCCAGATCGACGGGTTCCAATACATTGCCAACCGAAAG
GAGTTTGACGAGCTCGATACTTCCAACGCCACCCTACCCCTTCTCGCTCTCTTCACCGAC
TACGACATGCCCTACGAGATTGACCGAGTCCCCGAGCAGTTCCCCTCTCTCAAGGAGACC
GCAATCTCTGCCCTTGAGATTCTTCACCAGGAGACCAAGGACTCCGACGAGGGATTCTTC
ATCATGATCGAAGGTTCTCGAATTGATCACGCCGGCCACCAGAATGACCCCGCTGCTCAG
GTCAGAGAGGTTATGGCATTCGACGAGATGTTTGCTGCCGTCGTTGACTTTGCCGATTCT
CTTGACACCGAAACCATCATTGTCTCCACCTCCGACCACGAGACTGGAGGCCTGGCTATC
GCTCGACAGGTCCAGGCTGAGTACCCCGAGTACGTCTGGTACCCCGAGGCTCTTGCTGCT
GCACAGCACTCTGGAGAGTACATTGCTCGAAAGCTGCAGGCGTTTGCTCGACCCGACCAC
CCTTCCGAGGCCTCTGGCTCGAAGCTGGAGAAGTTCGTCAAGCGAGAGATCCTCGAGAAC
GATCTTGGAGTCAAGGACTACACCAAACAGGAGGTCAAGGCTCTGATTAGAAACCGGGCT
GACCCCATTGACACCATTGTCGACATTGTTTCTCGACGATCCCAGACGGGCTGGTCTACG
CACGGCCACTCCGCCGTCGATGTCAACATCTACGCTCACTCCAACAAGCAGAGCGGTCTC
GACAAGTTGGATGCTCTGCGAGGAAATCACGAGAACATTGAGATTGGTCAGTTTCTGGCC
AAGTACCTGGAGGTGGACGTTGCTCGAGTGACGGAGATTCTCGAGGACCTTCCCGTTCGT
GTTCAGCACGTTGAGGAGATTGATGACTGTGACCAGTACCATCATGGTTTGTATTAATCA
GCGAAGACTGCGACCTAGTATCTTCACTGCGTGACATCTGTAAACCTATTGTAATAGTAT
GATTATGAATTAGATGAGCAGGTCACACTACTGGTATTTTTTGTCATTGTGACAGCAGCT
AGGATATTATGTCAAGAAAGTCGCAACCAACTCATATTATGGCCAACGCTGACGTTGATC
TTTCCGCGTTGAGTAGGAAGGGTACATACACCACGTCAGAGAAACACTCGAATAAGGGCG
TGAAGATAGTCAATAGAGATGCACTGCGAAATGTTGATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16709g_CDS-001

Protein length: 559 aa.
Product: Repressible vacuolar alkaline phosphatase, putative

>YALI0F16709g_CDS-001 MDQKTDSREYLDGFKAGQKVAYERLYWRRILVLFGGLAMVLGFFGYKGYAVNDVLDLDLS
MSRADSVNDNPLVSPLSKPKKNVIFMVTDGMGPASVSLARTYRQYVQGLAYNNTLTIDKH
FIGSSRTRSSDSPVTDSAAGATAFSCGAKSYNGAISVTPDYKACGSVLEAAKRQGLKTGL
VVTTRITDATPACFGAHVAHRSQEDEIADQLLGYATPLGRSVDLLMGGGRIHFTTKGRQD
GRDLIAEAQIDGFQYIANRKEFDELDTSNATLPLLALFTDYDMPYEIDRVPEQFPSLKET
AISALEILHQETKDSDEGFFIMIEGSRIDHAGHQNDPAAQVREVMAFDEMFAAVVDFADS
LDTETIIVSTSDHETGGLAIARQVQAEYPEYVWYPEALAAAQHSGEYIARKLQAFARPDH
PSEASGSKLEKFVKREILENDLGVKDYTKQEVKALIRNRADPIDTIVDIVSRRSQTGWST
HGHSAVDVNIYAHSNKQSGLDKLDALRGNHENIEIGQFLAKYLEVDVARVTEILEDLPVR
VQHVEEIDDCDQYHHGLY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG