YALI0F16643g

Overview

Description weakly similar to uniprot|B8NW37 Aspergillus flavus putative translin-associated factor TraX
Locus type CDS
Locus tag YALI0F16643g

Location

Species Yarrowia lipolytica Positions 2226610..2227416
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 807 (nuc.)
Previous locus YALI0F16632g Next locus YALI0F16665g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16643g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16643gYALI0F16643g_mRNA-001YALI0F16643g_CDS-001

Nucleotide sequence

 

>YALI0F16643g
ATGTCACTGAAACGAAACACAGAAACAGAAGTCGAGGAGGGCGTCAAGGTGGCCAAAATC
GAGTCCAGCACGGAAGAAACGGCCAAAAACTTTTTTCTCCAATTCAAGACACGCCTCGAC
ATCTCTCAGGATGAGCGGTCTCAGGTCATCAACATTTCGCGAGACGTGACGGCAGCCAGC
AAGAAAATCATTTTTGCACTTCACAGGGTCAAAAAGAATGGCCAGGAGCCGCTCTCATTG
GCTCCAGACGTACAGGCGACCCTGACGTCTCAGTACAAGCTGATTGCTGCCAAGTTCGCC
GAGATCAACAGTTTAGTTGGCAACAGCACAAACGCGTACTGGAAATACTCTCGGCAGGTG
TCTGGAGCTTCGGAGGAGATGATTGAAGCCATGTCTTTCCAGTTCTGGCTCGAAAGGGGC
CAGATCATGACCATGGAAGAGCTGCATGAGATCATCAAACAACACAACATTGATGTATAT
GTCCATCCTAGAGACTACATTTCTGGTCTGTTTGATCTGACCGGTGAGCTAATGAGATAC
GGAACTCTGAACAAAGCACATGGATTGCCAATTGTGGCGTTACTGCGGGAGTTCGAGTAC
TCTGTCTTCGTGCTCACAGGTGATCCAAACCTGGTCAAGAAGATAGAGGTGTTCCAGCAG
AGTCTGGCTAAGCTGGAGAGACTCTTGTACGATCAGAGCTTGCAGGTTAGTGAAGTTGTC
TGAAGAGAATAGATGAATTATGATAGAGACGGTATCGAAGGTACTCGAGGATGTTTATAG
CATTTTGAATATAACAATGGCATGTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16643g_CDS-001

Protein length: 241 aa.
Product: Conserved hypothetical protein

>YALI0F16643g_CDS-001 MSLKRNTETEVEEGVKVAKIESSTEETAKNFFLQFKTRLDISQDERSQVINISRDVTAAS
KKIIFALHRVKKNGQEPLSLAPDVQATLTSQYKLIAAKFAEINSLVGNSTNAYWKYSRQV
SGASEEMIEAMSFQFWLERGQIMTMEELHEIIKQHNIDVYVHPRDYISGLFDLTGELMRY
GTLNKAHGLPIVALLREFEYSVFVLTGDPNLVKKIEVFQQSLAKLERLLYDQSLQVSEVV
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG