YALI0F16599g

Overview

Description weakly similar to uniprot|Q6BXF0 Debaryomyces hansenii DEHA2B03564p
Locus type CDS
Locus tag YALI0F16599g

Location

Species Yarrowia lipolytica Positions 2220226..2223309
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3084 (nuc.)
Previous locus YALI0F16577g Next locus YALI0F16632g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16599g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16599gYALI0F16599g_mRNA-001YALI0F16599g_CDS-001

Nucleotide sequence

 

>YALI0F16599g
AGGCACAAACCCACAGAAGCACGCCGATTCCAGCCAGTTGAGACCCCAGCGTTGCCCGGC
AGCAGTGTGACCAGCCCGACCACAACCCCTTCCTAAACAGGAAGCTCTTTGAAAAACTGG
CCGTTCGATTCGCATCTTGAGCAGAGCGCGAGCCTTCACGTACGGCATTAAAGTGAGTAT
TGCTGGAGACTTGCCACAGGGCAATGTTTGTAACTAGGGAATGAACCAGAGCGCACAAGA
TCAATGTGTGCCACGTCGCAGGAACTCCCCATGACTGTCGAGTGACTGGCTGTGGCAAGG
TGGCGAGACATGGGAAACTCATAGATACAAGCTGTTTCATGTGTCCAAAAGGCATGGCTT
GCCCTACGTGTTCACCTCGAGACACTTGTCGTGTGCTCCGGCTCGTCGGTGATACACGAG
GCTGCAATGGTTGTCGTATTTTTTGTTCAGTTGGTGGCATGTTGTGAGTCGTGACTGTTT
GCCATGGTTTATGACTGACAGGGAAAATGTGTGACCCATCCTCTAGGTTCACCCAGAAGT
CTCGACACTTTGAGTGGAATGATAACACAATGAGGCTACAACATGTTACAATCATTGCCG
TCCTGATACAACAGATCTCAACACCAACATCATACTAACGTAGCTTAGTCAGGGCGCACA
CCACCACTGTGTACGAACCTCCTACATCGTCCAGATCAACACGGTCTACATTAACGCGAC
AATGAGCACTACTAGTCCCCCAGAAAAGAAACGGAAGAGAGAGAAAGTCGCAAGAGCATG
CAAGAGATGCAAACATAGAAAGGTGAAATGCGATGGAAAGTTCCCTTGCGAAACGTGTAT
CAGAGCAGGTGCCCAATGCGTGTATCTGGGAGCTGAACGTGAGCATATGACCTTCCAGGA
ATGTTACCACAAAGACGAGGACGAGAATCGCGACACTGCCCACCTGATCGCTATGCCCCC
TGGACCTCCATGCTCCGAGGGCATTCGAGCAACACACGAGAGTAATCATTTGGATGAGGA
AGTGACCTCTGGACAGGCTCATGTCACTCAACCCAGCCAGATCAACGGAAACATTGGTTC
TAACGTGAATACAGGTCTACCAGGACCCGGAAGTATTCCTGCCAACGGAGTTAATGGTCT
CCCCAATCAACATCCTCGACATGACAGCACACAGGGAAGTAGTCATGGAAGCAACGCTGG
TCTTCCCAACAGTCTTGGCGGTAGCAACCCCTACATGAACGTTCCATCCACCATTCTTCC
ACCCATACGAAAAACGAAATATACAAAGAACTTCACTTACTACATTGCTCCGCTCATGGC
CAAATGCATTCAAGACGGACTGGGCAAAGAAGGAGCCAAGAAGATTGCAGTTCCTCGTTA
CCAGGCGTATGGATGGAATATGAGTGGTATCCATTACCTGAAATCCCGATCTCTAGCTTC
GTCGGACCCACTCATCACCGAAGTCCGTCTATGGCATCTGATTGACGTCTATTTCAAGTT
TTTGAACCCCATCTTTTCGCCTCTTTGCGAAGGAGTCTTCCGAACTCAGCTTGAAAAGTT
TTACCAAACACGAGAATCTCGAGAAGTCGACCCCGCACCTACATCATCACACGACGCTGC
CGGTGTTAATGTAGCAGATCCTCCGTCAGACTCATGTGACAAGCCAGAGATTCGGTTATT
CAACGCCCTCTGCCATATTGCATGTGCCACCGCCATGCGATACCTGGAGGTGACTACAAA
CGAGATCTTCGAAGCTCATCTTGAAGAGACACTGTTCGACGATGGTTACAAGACCATTCA
GGCATTGTCATTTGAATGGCAATCATTAGATCTGATCCAGGGATGGCTGCTCATCACATT
TTATCTCCGAATGTGTCACCGTCAGAGTTCAGCTTGGAGTGCATTGGGTCAAGCAACTCG
AATGTGTATGGGCATGTATCTGTTTGAGGATCTGCAACAGGATGAGGAGGATCTTGACCC
GTTTGACCGTCAGAAGCAGGAGCGTGTCTTTTGGTGTGCCTACACATGGGACAGAATCCT
GTCTCTTGAAACAGGAAGACCGTTCAGTTTCAGAGATGATGCGATTACCTTTGAGCGACC
AACAAGTTACCAGAATGATGGGTGGTTGAGTATTACCAGTTATGGTTTGCTGAAGCTAGC
ATATGTCATTTCTCTATACTCGCCAAGTAAGGGCTTCAGGTTTGAGCGACAGATCTTCGA
ACCTGAAAAGAAAAAGATCATGCTTAATGCACTCCACGCTTGGAATGAGGAGATGAAATC
CATTGGTCTTGGGTTCGACGATGATCTCAATCGTCTTCCCGGCGTCCACGCTTCCACATA
CGCCTTCCTGCGCCAACAGTACTATTCAGTGACTTACATATTCAACGTCGAGACACTCCT
GCAGTTTTCTTCTGGTGGAAGTATCAGATATGACGGAATAGGCTCGACGAATGGTCTATT
ATCATCAGCCCATGGTCTTCTCAAGCTCAGCCTTGTCATGAAGAGAGAGAAGTGCTTGAT
CAGCCCGCTGTGGCTGACTCTCAGTACACTTTTCAATACTGGATGTGTCTTAATCTGCTT
CGCCAACGTTGGTATCGACTGGACTAACCTGGCTGACAACCTCGGCAACATTGTTGCTCT
AGTAACTGACCTGCAGTTGTCTGGCAAGTTCATCATGGCTGACGAGATTCTGTGGGGTCT
GAAAACTCTCAACCACGCCGTCTATTTGCGTCTTCAACGAACCCAACAGATCTTCCGCGC
TGTTGGTATTGATCATGGCAGTCAAGCAGTCAATCACGGCAGGTTCAACCGAGCTGTCCT
AACCCATCAGCAAACAGTTAGTTCACCACCTCAGGATCTCCAGAAGCTCATGAACCCGAA
CGGTGTGGAGGGAGTCCTATTCGGGGCAGCGATGGCTACTGGCGGCGGAGGAGAAGAAGA
GAGGGAACCCCCTCACAACTGGTTCGGAAGCTTCAACTGGGATGACCAGTGGGTGTAATG
CTAAGGACTGTGACCCGAAATGTCCCTTATTGTGTGATTCCATATTGTACATATTGTAGT
AATACTAATGATTTATGAATGGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16599g_CDS-001

Protein length: 759 aa.
Product: Conserved hypothetical protein

>YALI0F16599g_CDS-001 MSTTSPPEKKRKREKVARACKRCKHRKVKCDGKFPCETCIRAGAQCVYLGAEREHMTFQE
CYHKDEDENRDTAHLIAMPPGPPCSEGIRATHESNHLDEEVTSGQAHVTQPSQINGNIGS
NVNTGLPGPGSIPANGVNGLPNQHPRHDSTQGSSHGSNAGLPNSLGGSNPYMNVPSTILP
PIRKTKYTKNFTYYIAPLMAKCIQDGLGKEGAKKIAVPRYQAYGWNMSGIHYLKSRSLAS
SDPLITEVRLWHLIDVYFKFLNPIFSPLCEGVFRTQLEKFYQTRESREVDPAPTSSHDAA
GVNVADPPSDSCDKPEIRLFNALCHIACATAMRYLEVTTNEIFEAHLEETLFDDGYKTIQ
ALSFEWQSLDLIQGWLLITFYLRMCHRQSSAWSALGQATRMCMGMYLFEDLQQDEEDLDP
FDRQKQERVFWCAYTWDRILSLETGRPFSFRDDAITFERPTSYQNDGWLSITSYGLLKLA
YVISLYSPSKGFRFERQIFEPEKKKIMLNALHAWNEEMKSIGLGFDDDLNRLPGVHASTY
AFLRQQYYSVTYIFNVETLLQFSSGGSIRYDGIGSTNGLLSSAHGLLKLSLVMKREKCLI
SPLWLTLSTLFNTGCVLICFANVGIDWTNLADNLGNIVALVTDLQLSGKFIMADEILWGL
KTLNHAVYLRLQRTQQIFRAVGIDHGSQAVNHGRFNRAVLTHQQTVSSPPQDLQKLMNPN
GVEGVLFGAAMATGGGGEEEREPPHNWFGSFNWDDQWV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG