YALI0F16159g

Overview

Description some similarities with uniprot|Q12263 Saccharomyces cerevisiae YDR507C (ohnolog of YCL024W) GIN4 ser/thr protein kinase
Locus type CDS
Locus tag YALI0F16159g

Location

Species Yarrowia lipolytica Positions 2167322..2169577
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2256 (nuc.)
Previous locus YALI0F16137g Next locus YALI0F16170r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16159g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16159gYALI0F16159g_mRNA-001YALI0F16159g_CDS-001

Nucleotide sequence

 

>YALI0F16159g
ATGGAAGACTTTCTATTTCCTGGAAAATCAGGACCCACCACTGGCATCACCCGCAACCCC
GACGATGCCATGACGGTAGCAAAGGGGTTCGAGTGCGACTCGCCCATGCAGCTCAACTCG
CCACCAGCAGAGCCCCAGACCGACGATGACAACGACACAGACATGAACGCAGAAACGCAG
TCGCCACAGAAACCGTGCCAGTACACCTCGCGATTCGCCAAGGCAAACACTTTCAACAAC
CTCAAGGCGGACGAACAGCCACAGCCCGTAGACGTGCTTGGAGGAGGAGCAGGCAAGGGA
CACTTCTCAAGGCTGTCGCAGACACTCTCCAAGTCGTACAGAGATAGTGACTATACGTTC
CGAGAACGTGTGCCCTTTGGAGAGTCCGACGAATACGTCCCCGGCATGGACTTCACCCAG
CAGCAGGGCGACACCAAGAGCGATGCAACCACCAACCTGTCGGGACCAGCCTCGGTGGCT
TCTCCTCGACGTTCGGATACCGGAGAGTTCAGGGATATCAGCACGGGCTCCAGTTCTGTC
GACCTCGCTGCTTCGGCCGCTGCTTCTGTAGACTGGAAGTCTTTGCCCTTCAGCACCCGA
AAGAAACTGCGATCTGCCATTGCCGAGATGCAGATGTCGCCCCTTAACACAGTGTCGTCG
CCTATGTCCATTTCGCATAAGGATGACCATATTGCAAACTCACTGTTCTCCCCGCAGTCG
TTTGGCCAGAACTCCTACGGCGGCTCTGTGGGTCCCCCTCCCGCTATCCCCTTTTCCAAG
CGACGGTCTCGAAACAACACCCTGCTCAACTCGACCCAAGACTCTGCTTCTTCTGCAGCC
TCTTCGCCTGCTCAGAACTTTCTCGCCAAGTTCTCTTCGCCCTCAGTGTCTCGGTCTGCC
TCCGTGAACATGGGCAACATGACTACCCTGGGCAGTCAGCCCGAGGGAGTGGTGGCCGGA
ACCCCATCTGGCAACGCAGAATTTTCTCTGACTGCTGACGCACTCACTGGTGAAGAGATT
GGACGATACACTCTGGGACAGAAGATTGGATACGGAGGGTTCTCGGACGTTTACGAGGCC
GACTGCAAGTCTCTTCGTGGAGGAGAGCCCAACAAACCCAAGGCGTGCAAGGTGGTGAAG
AAGAACGCCCGGCTGGCTGCTCGAACCAGCGAGTCTGACCTCTCCAGTATGGAGTCTGCT
GACTCTTCTGCCTTCAACTCTAGACGCAACTCCAACTCTGTTGGCAGTATTAACGATACA
AGCCGAAGTGCAATTGTCCCGTCCGAGGAACATTTGCAGATGCTGCAGGAGGTCAACATT
TGGCGCACGCTTCGACACCCTAATGTACTGGATCTGGAGTATGTCTATGAGGACAACCGA
GCCATCTACTGCTTCACCTCCAAGATTATGGGAGGAACACTGTTTGATTTGGTCAAGAAT
AACCGACAGGGCATTGATGTGGAGACTGCTCGACAATATGCCTTCCAACTGGCTTGTGCC
ATGTCGTACCTACATGAGTCCATGCACATTGTCCATCGAGACATAAAGCTTGAAAACTGT
CTCTTGGACCCCCAGGATGATGGTTCGTACAACCTGCTGGTGTGCGATTTCGGCATGTCT
GACTACATCAACCAGGACGAGGAGCATGAGAACTCTCGACGACAGAACCGACCCATTGGT
CCCTCCACCTATTCTTCTACTCTAAGAGGGGGCACTACCACCGCCAATGGTACTGCTACT
CCTGTGCCTTCCACTCCCTCTTCTCAGGGAGGCTCGGTGAAGCGAGACAACCTTGGCTCC
CTTCCCTACGCTGCTCCTGAGCTGCTTTCTACAGCCGAGCCCATTTACCATCCTTCCGTC
GACATTTGGTCCTATGGAGTGGTGGTCTACGCCCTCCTGGTAGGTAACTTGCCTTTCACC
CATTCTTTTGTTCCCAAGCTTCGAGGTCTCATTCAGAACGCTCAATGGGACCGGGAGCTT
CTTAAGAGCAAGCTGGGTGACGGCAACGACGACTGGGTTGAGCTTCTGGAGAAGTGTTTG
ACCGTGGATCCTGAGGAGCGTGCCTCTATTCGTCAGGTTCTGACCTCCTCTGTTTTTGAA
TCTCTGGCTGAAGCCCTTGTTAGTGACACTCAATAGAGAGTGACCACACTCAAAACCAAA
AACAACAACCATCGCTACTAACAGTCTTTTGCATGTGTCAACCTTTTACATAGACACCTT
ATGAATAATGAATATATTGCATGAAACAATAATAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16159g_CDS-001

Protein length: 712 aa.
Product: Conserved hypothetical protein

>YALI0F16159g_CDS-001 MEDFLFPGKSGPTTGITRNPDDAMTVAKGFECDSPMQLNSPPAEPQTDDDNDTDMNAETQ
SPQKPCQYTSRFAKANTFNNLKADEQPQPVDVLGGGAGKGHFSRLSQTLSKSYRDSDYTF
RERVPFGESDEYVPGMDFTQQQGDTKSDATTNLSGPASVASPRRSDTGEFRDISTGSSSV
DLAASAAASVDWKSLPFSTRKKLRSAIAEMQMSPLNTVSSPMSISHKDDHIANSLFSPQS
FGQNSYGGSVGPPPAIPFSKRRSRNNTLLNSTQDSASSAASSPAQNFLAKFSSPSVSRSA
SVNMGNMTTLGSQPEGVVAGTPSGNAEFSLTADALTGEEIGRYTLGQKIGYGGFSDVYEA
DCKSLRGGEPNKPKACKVVKKNARLAARTSESDLSSMESADSSAFNSRRNSNSVGSINDT
SRSAIVPSEEHLQMLQEVNIWRTLRHPNVLDLEYVYEDNRAIYCFTSKIMGGTLFDLVKN
NRQGIDVETARQYAFQLACAMSYLHESMHIVHRDIKLENCLLDPQDDGSYNLLVCDFGMS
DYINQDEEHENSRRQNRPIGPSTYSSTLRGGTTTANGTATPVPSTPSSQGGSVKRDNLGS
LPYAAPELLSTAEPIYHPSVDIWSYGVVVYALLVGNLPFTHSFVPKLRGLIQNAQWDREL
LKSKLGDGNDDWVELLEKCLTVDPEERASIRQVLTSSVFESLAEALVSDTQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG