YALI0F15719g

Overview

Description weakly similar to uniprot|A3GFW8 Scheffersomyces stipitis decapping protein involved in mRNA Degradation
Locus type CDS
Locus tag YALI0F15719g

Location

Species Yarrowia lipolytica Positions 2123226..2124077
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 852 (nuc.)
Previous locus YALI0F15697g Next locus YALI0F15741g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15719g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15719gYALI0F15719g_mRNA-001YALI0F15719g_CDS-001

Nucleotide sequence

 

>YALI0F15719g
ATGGCCCGGAAGAAGAAGCAATCAGAGGGCAACGCCCAGCTGAAGAAGAAACAACAACAG
CTTGAAGAGTATTCGCGACAAACGCTCAACCACATCGCGCTGACCAACATTGATCAGAAA
ACTGGCCAGGTGTTCTTCAACTCCGCCATCTGCTCAGTATACAAGTTCTCCATGACCTCC
AACAGCTGGGAGAAGATGCCTGTGCTGGGCACATTATTCATCTACAGTCGGCGAGTGACT
CCTGAGGACGAGACGGATCCCTACCCTTATGCCCTCATCATTCTCAACCGAACTAGTCCC
GAGAACTTCTCCCTCGGCCTAATTCCTCAAAACGTCTCTTATTACACAAACGCAGGCGTT
CAGAAGGACACCAACGACATCCCAGAGATGAACAGCAGTTTGGAAGACTCCTTTATCATG
GTTTCGGCAAGTGATGGCCAGATGTATGGTCTTTGGCTGTTTGATGAGAAAGATAGAGAT
CCGGCATTGAGCCTGATCAACTGGTGTCTTCATGAGAGTGGTCAAACCACGCAGCAGACC
CAGCAAACACAACAGACACAGCAGACACAGCAGACACAGCAGACACAGCAGACACAGCAG
ACAACGCAGACAACGCAGACAACGCAGTACGCAAACTAGAGGTCTAACGTTCGGGTCGGA
GTGACTGGATGAAGTCAGGATCCTCATACTGTCACTTTTTTTTGTCGAAAACGCTGTCTG
TCATACATAAGGGGCACCAGAGCGTTCAGGGATGATGTAAATTAGTAAGGAAGAGGTTGA
ATTGGATGCATAGTTATTTGCATCGCCTAGAAGCCAGTAACAAGTGTTTACTGTAATATA
TCGTTAACTTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15719g_CDS-001

Protein length: 213 aa.
Product: Conserved hypothetical protein

>YALI0F15719g_CDS-001 MARKKKQSEGNAQLKKKQQQLEEYSRQTLNHIALTNIDQKTGQVFFNSAICSVYKFSMTS
NSWEKMPVLGTLFIYSRRVTPEDETDPYPYALIILNRTSPENFSLGLIPQNVSYYTNAGV
QKDTNDIPEMNSSLEDSFIMVSASDGQMYGLWLFDEKDRDPALSLINWCLHESGQTTQQT
QQTQQTQQTQQTQQTQQTQQTTQTTQTTQYAN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG