YALI0F15587g

Overview

Description highly similar to uniprot|P15019 Saccharomyces cerevisiae YLR354C (ohnolog of YGR043C) TAL1 transaldolase
Locus type CDS
Locus tag YALI0F15587g

Location

Species Yarrowia lipolytica Positions 2095273..2096575
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1303 (nuc.)
Previous locus YALI0F15565r Next locus YALI0F15609g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15587g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15587gYALI0F15587g_mRNA-001YALI0F15587g_CDS-001

Nucleotide sequence

 

>YALI0F15587g
ATGTCTTCCAACTCTCTTGAACAGCTTAAGGCCGCCGGCACCACCGTTGTCACCGACACT
GGTGAATTCGAGTGTGAGTATTTGATCCTGACGGGGACGCAATTGACAGATGTTACAATG
GTTGGTCATGTCACGACATGGTAATGTGGCGCGCACAGCATTGATAGGCTGGCAGGGCAA
GTGGCAATTGACTCAATTGGGTCTGTGTTACCCAGTAACGCATGCCTTGCTCTTTTTCGG
ATTGCTCTGTCCGCTGCTACCGGTGCCTCCATTGCAGTTGTACGAGTTTGCCTCTGAACA
CAATCTAACCCAGCCATCGCCAAGTACAAGCCCCAGGACGCCACCACCAACCCCTCTCTG
ATCCTGGCCGCTTCCAAGAAGCCCGAGTACGCCAAGCTCATTGACGAGGCCGTTTCTTTC
GCCAAGACCAAGTCCTCCGACCCCAAGGAGCAGGTCAACATTGCTCTGGACCAGCTGCTC
ATCGAGTTCGGCTCCGAGATTCTCAAGATTGTCCCCGGTCGAGTCTCCACCGAGGTCGAC
GCCCGACTCTCTTTCGACAAGGACGCCACCATCAAGAAGGCTCTGCAGCTCATTGACCTC
TACAAGGCCAAGGGCATTTCTTCTGACCGAATCCTCATCAAGATCGCCTCCACCTATGAG
GGTATCCAGGCTGCCAAGGAGCTCGAGTCCAAGCACGGTATCCACTGTAACCTGACTCTT
CTCTTCTCCTTCGTCCAGGCCGTTGCCTGTGCTGAGGCCAAGGTCACCCTCATCTCTCCC
TTTGTTGGCCGAATCCTCGACTGGCACAAGGCCGCCACCGGCAAGACCTACGACGCTGCC
GAGGACCCCGGTGTCATCTCCGTCAAGAACATTTTCGACTACTACAAGAAGTTCGACTAC
AAGACCATTGTCATGGGTGCTTCTTTCCGAAACACCGGTGAGATCAAGGAGCTTGCTGGC
TGTGACTTCCTGACCATCTCCCCCGGTCTGCTTGAGGAGCTGCTCAACTCCACCGACCCC
GTCCCCCAGAAGCTGTTCGCCGACAAGGCCAAGTCTCTGGACATTGAGAAGAAGGCCTAC
CTCGACGAGGAGCCCATCTTCCGACGAGACTTTAACGAGGACCAGATGGCCACCGAGAAG
CTCTCCGACGGTATCCGAAAGTTCGCTGCTGACGCCGTCACCCTTTCCAAGCTCATTGAG
ACCAAGCTCTCCGCTTAGGCGTCTCTTTGGTTACTTTTATTTATGTATCCTAACAAGATA
GATTGTTGATTTGAATTGTGAATTGTGAATTGTACTTGAACTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15587g_CDS-001

Protein length: 326 aa.
Product: Transaldolase, putative

>YALI0F15587g_CDS-001 MSSNSLEQLKAAGTTVVTDTGEFESIAKYKPQDATTNPSLILAASKKPEYAKLIDEAVSF
AKTKSSDPKEQVNIALDQLLIEFGSEILKIVPGRVSTEVDARLSFDKDATIKKALQLIDL
YKAKGISSDRILIKIASTYEGIQAAKELESKHGIHCNLTLLFSFVQAVACAEAKVTLISP
FVGRILDWHKAATGKTYDAAEDPGVISVKNIFDYYKKFDYKTIVMGASFRNTGEIKELAG
CDFLTISPGLLEELLNSTDPVPQKLFADKAKSLDIEKKAYLDEEPIFRRDFNEDQMATEK
LSDGIRKFAADAVTLSKLIETKLSA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG