YALI0F15125g

Overview

Description some similarities with uniprot|P34226 Saccharomyces cerevisiae YBL061C (ohnolog of YER096W) SKT5 protoplast regeneration and killer toxin resistance protein
Locus type CDS
Locus tag YALI0F15125g

Location

Species Yarrowia lipolytica Positions 2025157..2028232
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3076 (nuc.)
Previous locus YALI0F15103g Next locus YALI0F15147g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15125g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15125gYALI0F15125g_mRNA-001YALI0F15125g_CDS-001

Nucleotide sequence

 

>YALI0F15125g
ATGGACGGCATCTCACGAGCCCTACCTGCCAAAGACCGGCTGAAACGTCGCGATGGGCCT
GGAGACGCCCCCATGGCCTCTGTTCAGCAGTACAACCAGCCCGGCATGAACTACGGCCGG
TCGTATGGCGTGCCGCGACGCGGTAGACCGGGGCCTCCCCAGCGGTTTGCTCCTCCTGGA
CCTCCGGGACCTGGCGGACTTCCCGGAGCGCAATCCCACGGAGGCCCGGGGCCTCGTCAA
CGATACAAACCGGCCAAGCAGTTCCAACCGCCCCCCAAGCCCGTGCAGCCGCCTCCACAG
CAGCAATACTACGATCAGGGCTATGATCAAGGGTACGATCAGGGCTACGATCAATACGGA
GGAGGATACAACCAGGGCTATGACCAGGGCTACGACCAGTACGGAGGGGCTCAGGGGTAT
GACCAGAACTACAACCAAGGCTACCAGAATGCTCCCCCACCACCTCAGAATCACGGACAT
GGACACTACCAGCAACCACCACCTCCCCAACGCGGCCCCCAGGGTTACAGAGCGCCTCCT
CAGCATGCTCCTCCTCCCCAGCAGCATCACAAGCAAGCTCACGCCCCACCTCCCGCCCAG
AAGCACTACGACCAGGGCTACGATAACCAGAACTACGATCAGGGCTACGACCAGGGATAC
GATAACCAAGGATACGACCAGGGTTATAACAACCACGGAGGTTACAACGACGAAGGATAC
GACAACCACGGTTACAGCGATCACCAGTACGATCAGCCGGCTAACAACGGAGGCCAGCCA
CAGTCGTATCCTCCTCGACAGGACGAGTATCAGCATCATCCCAACAACAGTTACCAGCAG
CCGCAACAAAATGCGTTTTCGCAGTCGGAGCCGGACCTCACTGCAGGCATCAACAATCTT
AGTGTGCGATCCAAGAGCCCATTGCAGAACCCGGGGCCTCCCGTGCAGTCGTATGCAGCC
ACAGTGGCCAAACGGAACTCGCCCCAGGCCCAGCATCTGCCCTACCCTCTCCCCAAGGCC
AAGGTTCCTGCGCCTGCGTCTGGGCAGAGCTCCGTGGTAAAACCGTCCATCCCGCAGCAG
GCGTCTCGTAGCACGCCCGATCTGCACGACTACAACCGCGGCAGCAACGACTACAACCAC
AGCAGCAACGACTACAACCGTGGCAGCGACAGAGGCAGCAACGACAGAGGCAGCAACGAC
AGAGGCAGCAACAACACGTTTTCGCCTACAAACACCGAGTCGCGTGATTCCCATGACTCG
AACCCTGGCTTTCAGTTCACGTCGGCAGCAGCGTCAAACTCGTACAACACAAACACAAAC
CACAGCGACAACCGAGGGGCGGAAATCGAGCGCAAAATCTACGTGCGAATGTCGCATTAT
CCTCAACCCGAGAACCCCGTCAACCCCATTCCTCACCAGTACGTTGACAGCTACAAGGAA
GAGAATCCCTACGACGAAGAGCGTACTCAGCTGCCTACACATGCTCCTCCTCCGGTTCCT
CAGCCTCAGAACAGCAAGTACGCACTGGACGTTCCTGCAGCAGTGCCTGTGAAGCCCCCG
ATGCATATCAACACATCATCACCAGCACAAGCGGCAGCGCAGTTATCGCACCCCTCGCCC
ACAAAGGCGTCTTTTTCACATCCCAACGCGCCCTATCCCATCAAGACAGGCAACCATGAC
GGACGAAGAGGTGATGACAGAAGAGGTTCAGATGACCGACGACAAGATCCTCGTGGAGGT
GGTGGTGACGACCGACGAGGCTCAGAAGCAAAGACTAGTGAATTCCCGAGCCCCAGTAGT
CTCACATTCACGCATGCGTCTTTGGAGGCCAAAAAACAGCGTGCTATGGCGAACCCAGAC
GACAATCATGCCCAGCTTGAGTACGCACAGGCAATGTTCAAGGCTGCAGCTCAACTGGCA
GACAAGGCCCAGAACGGAAACCCCATCGACTCGAAAACAGCCAAGAAAAATAGAGACTAC
TGGACAACGCAGGGTCTGAAGATTGTCAAGAAGCTGGCTGCCGTCAACTATGCGCCTGCT
CTGTTTGAGTATGGAGTCCAGAGCTCAGACAAAGAGCGAGCGTTCGATCTGTATAACAAG
GCAGCCGGTCTGAGTCATCCTGAGGCCTCTTACAGAGTCGGAGTGTGTTTCGAGCTGGGT
ATTGGAACCCGACGAGATGCTCGAAAGGCTGTTCTGTGGTACAAACGGGCTGCTGATCTG
GGTGACACAAAGGCTCTCTACAAGCTTGGCATGACTCACCTTCACGGCACTCTAGGGGAG
CAGAAGAATATTCAGGAGGCTGTTGCGTTGTTGGAAGAGGCTGCTGCCAAGGCTGATTCA
GAGAACCCACATGCCCTTCATGAATTGGCTCTTCTATATGAGCGTCCCACTTATGAGATG
AGTGCGATTTCGGCCGATGGGCGATCTGTGGTTCGTAAGGACGAGACTCGAGCACTATCG
CTTTTCATGGCTGCAGGCAAGCTCGGTTATCCTCCTTCTCAGTTTCGTCTGGGCTGCTGC
TACGAGTATGGAACTCTAGGCTGTGATGTCAACGCCAAAAAGTCCATTGCTTGGTACTCC
TATGCAGCTCAGAAGGGCGAGCCCGAGTCTGAACTGGCTCTGTCGGGCTGGTACCTGACC
GGCAGCGATGGTATTCTACAGCAGAGTGATACGGAGGCGTATCTTTGGGCTCGAAAGGCG
GCCGAGAAGGGTCTGGTCAAGGCCGAGTACGCTTTGGGATACTTCTGTGAGGTGGGTATT
GGTGTGCATAAGGATCTGAACGAGGCCAAGAAGTGGTATTTCAAGGCTGCTGCCCAGAAG
CACCCCAAGGCCATTTCACGGTTGAAGGCGATTAACGAGTGTTAAGACACTAAGACGAGG
GTGAAACGACATACGGCAAGAGAACGAGAGAGCGCGGAGAGATACACCTCACTCGTGTAT
GCCTGTGGCGACTGTTTTCCATGAGTCATTTAATCTCTGGAGCTCAGCATTGGGGTTATA
TTTGAAATCCAACCAGCAGGTTTTCGAATGGACGATAGATAATGAACATAATGTAATTGT
ACAAGAGTTGTAGGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15125g_CDS-001

Protein length: 955 aa.
Product: Conserved hypothetical protein

>YALI0F15125g_CDS-001 MDGISRALPAKDRLKRRDGPGDAPMASVQQYNQPGMNYGRSYGVPRRGRPGPPQRFAPPG
PPGPGGLPGAQSHGGPGPRQRYKPAKQFQPPPKPVQPPPQQQYYDQGYDQGYDQGYDQYG
GGYNQGYDQGYDQYGGAQGYDQNYNQGYQNAPPPPQNHGHGHYQQPPPPQRGPQGYRAPP
QHAPPPQQHHKQAHAPPPAQKHYDQGYDNQNYDQGYDQGYDNQGYDQGYNNHGGYNDEGY
DNHGYSDHQYDQPANNGGQPQSYPPRQDEYQHHPNNSYQQPQQNAFSQSEPDLTAGINNL
SVRSKSPLQNPGPPVQSYAATVAKRNSPQAQHLPYPLPKAKVPAPASGQSSVVKPSIPQQ
ASRSTPDLHDYNRGSNDYNHSSNDYNRGSDRGSNDRGSNDRGSNNTFSPTNTESRDSHDS
NPGFQFTSAAASNSYNTNTNHSDNRGAEIERKIYVRMSHYPQPENPVNPIPHQYVDSYKE
ENPYDEERTQLPTHAPPPVPQPQNSKYALDVPAAVPVKPPMHINTSSPAQAAAQLSHPSP
TKASFSHPNAPYPIKTGNHDGRRGDDRRGSDDRRQDPRGGGGDDRRGSEAKTSEFPSPSS
LTFTHASLEAKKQRAMANPDDNHAQLEYAQAMFKAAAQLADKAQNGNPIDSKTAKKNRDY
WTTQGLKIVKKLAAVNYAPALFEYGVQSSDKERAFDLYNKAAGLSHPEASYRVGVCFELG
IGTRRDARKAVLWYKRAADLGDTKALYKLGMTHLHGTLGEQKNIQEAVALLEEAAAKADS
ENPHALHELALLYERPTYEMSAISADGRSVVRKDETRALSLFMAAGKLGYPPSQFRLGCC
YEYGTLGCDVNAKKSIAWYSYAAQKGEPESELALSGWYLTGSDGILQQSDTEAYLWARKA
AEKGLVKAEYALGYFCEVGIGVHKDLNEAKKWYFKAAAQKHPKAISRLKAINEC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG