YALI0F14861g

Overview

Description highly similar to uniprot|P38624 Saccharomyces cerevisiae YJL001w PRE3 20S proteasome subunit (beta1)
Locus type CDS
Locus tag YALI0F14861g

Location

Species Yarrowia lipolytica Positions 1986062..1987049
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 988 (nuc.)
Previous locus YALI0F14839g Next locus YALI0F14883g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F14861g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F14861gYALI0F14861g_mRNA-001YALI0F14861g_CDS-001

Nucleotide sequence

 

>YALI0F14861g
ATGAACGGAATCAGTGTAGATATGAACCACCTGAAGAAGGGCGAGGTCAAGTGAGTACAC
CGCATTACAACTGGTACAGTTGTCCCTGCAATTGACCCCTTCAAGACCCCTTACTAACAC
AGCCTCGGAACCTCCATGTATGTATCACCATTTCGCCACCAACACCATCTAATGATACCC
CATCCGCAATCGCACAGAAACTAACAACAGTATGGCCGTCAAGTTCAAGGACGGAGTCGT
GCTTGGCGCAGACAGGTGAGTATCAACCAGGATGACCGCATTCGCCACCCGTCGGGACCC
ATCAAATGTTAGAACAATCCCACTAACACAGTCGAACAACCACAGGAGCTTTCATTGCCA
ACCGAGTCACCGACAAGCTTACTCAAGTCCACGATAAGATCTGGTGCTGCCGATCTGGCT
CCGCCGCAGACACACAGGCCGTGGCAGACATTGTCACTTATCATCTGCAATCATACGCCG
CCCAGAACGACAAGGACCCCTCTACGAAGGTGGCGGCCTCAATGTTCCAGGAGCTGTGCT
ACAACAACAAGGATAACCTCACTGCAGGTATCATTGTGGCTGGCTACGATGACAAGAACG
GAGGTGAGGTGTACAGCATACCTCTTGGTGGTTCGTTGCACAAGCAGGACTACGCCATTG
CCGGTAGTGGATCCACATACATTTATGGTCTTTGTCAAAAGAACTTCAAGCAGGACATGA
CCAAGGACGAGTGTGTTCTGTTCATCAAGAACTGTGAGTATTCCCCCGAAACAAGTATAC
CTGAGATATCCCGGTATTGTTACTAACATAGCGCTTGCCCAGGCCATTAAGTGGGACGGT
TCGTCTGGAGGAGTCATTCGAATTTGCATTCTCACCAAGGATGGAGCTGAGCGACAGATC
TTCTTCCCCGACGAGTATGAGGCTGATTACTGATTCTATAGGTTTTGGCATGTATGGAAA
GAATAATAATATACAAGTGAAGTTATTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F14861g_CDS-001

Protein length: 218 aa.
Product: 20S proteasome subunit beta 1, putative

>YALI0F14861g_CDS-001 MNGISVDMNHLKKGEVNLGTSIMAVKFKDGVVLGADSRTTTGAFIANRVTDKLTQVHDKI
WCCRSGSAADTQAVADIVTYHLQSYAAQNDKDPSTKVAASMFQELCYNNKDNLTAGIIVA
GYDDKNGGEVYSIPLGGSLHKQDYAIAGSGSTYIYGLCQKNFKQDMTKDECVLFIKNSLA
QAIKWDGSSGGVIRICILTKDGAERQIFFPDEYEADY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG