YALI0F14773g

Overview

Description weakly similar to uniprot|P54790 Saccharomyces cerevisiae YLL004w ORC3 origin recognition complex, 62 kDa subunit
Locus type CDS
Locus tag YALI0F14773g

Location

Species Yarrowia lipolytica Positions 1977091..1979200
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2110 (nuc.)
Previous locus YALI0F14751g Next locus YALI0F14795g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F14773g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F14773gYALI0F14773g_mRNA-001YALI0F14773g_CDS-001

Nucleotide sequence

 

>YALI0F14773g
ATGAGTAACCACGCCACTTTACTGCAACGGGAGGACCAGAAGACGTCATACTTCTTGAGC
GACGAGATCAGAGCTCTGAAGCGAAGGCGATTGGACAAATCAGACCCTCCCAAGAATGGC
CACAAGCCTGAGATTGACGAAACCAATGACAGTGGTGAAAACTCTGAAACAGCAGAACGT
GAAGATGAGAAGACGACTCTAGGAGAGATTGAAAATGAGGGACACGACAACCCTGACGAA
AACAATCCCTTTGCTCGACTGTTGGGTGGTAAGGAACCTTCCTCGGGTGTAAATCTGCGA
TGGAATATGTACCAGGAAGCTTGGGGTGCGCAAAAGGCCAAGATCGACGAATTGCTGGAG
ATGACCAACGGCAACATCTTGGAGGAAATTGTCGAGTACGTCAGTGAGTCAGATGCCGAG
AACCAAATTCCTGCAGCCCTAGTTTTCCCCGGATCTAACATCGCCAACCATGTCCGTCTC
TTTGGCCAGATCAGGGAGTGGCTGGGAGCTGTCAAGGGAGTTCATATGGTGACACTTCAT
GCAAGAACGTGCCCCAGTCTCAAAGCAGTTATTAAAAATATCGTCAGTGACCTGATTGAG
TCCGAGGAAGTTGCAGAGGAGGTGGAGGTGAGAGAGGAGGATCTCAACTACGACCGAAGA
GTGAAGTATGACTTTTCCATCCTGGCGGAGTGGTGTCGCAAGGTTGGTACTGATGCATCA
CAAAGGATTGTGTTGATTTTGGAGGATGTTGACTCGTTCGATGTCAAAGTGTTGTCAAAC
CTCGTACTCATGATGCACTCATACAAAGACGAGATTCCGTTCAGACTAGTATTTGGAATT
GCGACGTCATTGGAGATTTTCGAACACAAAATGACCAAAACAAGTATCCGACATCTGCAG
GGTAGGGTTTTCGATGCCCAAGCCACCTCCATGTTCCAGTCTCTGTTTGAAAACCACATG
TTCAATCTCAACAATAAAAGCATCATTGTGGGCCCTACAATTCTCGAGGATATCCTGAAG
CGTCAAAATGTGAGTACTGAGTCTATCGATGCATTCATTTCGTCTTTGAAGTATGCGTAC
ATGTCGCACTATTATTCAAACCCATTCTCGATCTTTACCAGTCGCTTGCTCGATGCAGGT
GACGAATACGAGCAGATTATTGACAGCAATCTTACTGGAGAACATATCGATGCTCTCAGA
ATGCTACCAAGCTTCAGAGCTCTGGCGGAGTCCAAAACTGATGCTTCAGAGATCGATGCT
CTGCTCTCTGACGACTCGCACATCATGGACATTACGAAGCAGGCTGTACACGACTTCAAG
GTAACGGCTCGACGGGTTGTTTCATTAATAAACCTCTTCGAGACCATTGAGAATGTTTTC
GGCAAATTTCCGATGTCCTGGGGGAAAACAGAAATCTACATTCCATTGGTTCGAGGCGAA
CTGGGAGAATCTGACTTCTTCAAGGCAGTTTGTGAGTCTTTCAAAAGCCAGAGCGACGAG
AAGATTCAGCATCTAGCCCAAGAACTCGCCAAGGACGACCTTTTCGATTGGTTGCATGAT
CCTGACACCATTCTGGATACCATAACAGAAGCTCTACACAACCTGAAACCCTTTAAACAG
CATCTGTACCACGAGATTTTCGTCACAGATCTCGCCACACTCCAACAAAATGTGTTCGTT
CCGTTCCAGCGACCAGCTATCGAAACTGCACTGGCCGACCCACGTCATTATCTCGGTATT
GAAGACGATGACAACAAATTCAAGTTTGTGGACCCCAACATCTCTACCCTGTTCACACTT
TATCGGGAATCAGGCATTTATATCAACATCTACGACTGGTACGTTGCTTTCAAAGAATGC
ATGCCACGGTCAGTCATTGAGACAGAACTGAAGAAGCAGGGACTGGTGCCTGAAGAAGGA
GAAACTGTCGAAGATTGGGACAAACGAACACTATCGTGGTTTTACCAGGCTGCAGCTGAG
CTAAAATTCATTGGCTGTGTCAGAGATACCAAACGAAAGGTCGAGAGTGTGGAGAAGTTG
ATCTGGAGAGGCCTCTGACATAAAAGCATTACCAACACATAGACTAATAAAAAAAGGCTG
CCCTTCCTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F14773g_CDS-001

Protein length: 686 aa.
Product: Conserved hypothetical protein

>YALI0F14773g_CDS-001 MSNHATLLQREDQKTSYFLSDEIRALKRRRLDKSDPPKNGHKPEIDETNDSGENSETAER
EDEKTTLGEIENEGHDNPDENNPFARLLGGKEPSSGVNLRWNMYQEAWGAQKAKIDELLE
MTNGNILEEIVEYVSESDAENQIPAALVFPGSNIANHVRLFGQIREWLGAVKGVHMVTLH
ARTCPSLKAVIKNIVSDLIESEEVAEEVEVREEDLNYDRRVKYDFSILAEWCRKVGTDAS
QRIVLILEDVDSFDVKVLSNLVLMMHSYKDEIPFRLVFGIATSLEIFEHKMTKTSIRHLQ
GRVFDAQATSMFQSLFENHMFNLNNKSIIVGPTILEDILKRQNVSTESIDAFISSLKYAY
MSHYYSNPFSIFTSRLLDAGDEYEQIIDSNLTGEHIDALRMLPSFRALAESKTDASEIDA
LLSDDSHIMDITKQAVHDFKVTARRVVSLINLFETIENVFGKFPMSWGKTEIYIPLVRGE
LGESDFFKAVCESFKSQSDEKIQHLAQELAKDDLFDWLHDPDTILDTITEALHNLKPFKQ
HLYHEIFVTDLATLQQNVFVPFQRPAIETALADPRHYLGIEDDDNKFKFVDPNISTLFTL
YRESGIYINIYDWYVAFKECMPRSVIETELKKQGLVPEEGETVEDWDKRTLSWFYQAAAE
LKFIGCVRDTKRKVESVEKLIWRGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG