YALI0F14113g

Overview

Description similar to uniprot|O74207 Candida albicans Phospholipase B
Locus type CDS
Locus tag YALI0F14113g

Location

Species Yarrowia lipolytica Positions 1901210..1902891
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1682 (nuc.)
Previous locus YALI0F14091g Next locus YALI0F14135g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F14113g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F14113gYALI0F14113g_mRNA-001YALI0F14113g_CDS-001

Nucleotide sequence

 

>YALI0F14113g
ATGATCGCAAACTTCCTGCTGCTTCTGGTGCTGGTCACCTTCGCTGCAGCCTCCTACACT
CCCTCCAAGGGAAGCTGCCAATACGACACCAACCTGCTTCGAGAAGCCTCCAGTATCTCT
CCTGATGAGGCCAACTACGTTGCCTCCAAGCAGTCCAGTTCCGATTCCGCTTTCCAGAGC
TACCTCAAGAACGTCAACATCCCTGGTCTGGATGTGAACCAGTCTGCCAACATTGCCCTT
TCCTTCTCTGGAGGAGGATATCGAGCTATGTTGTCCGGTGCTGGCCAATTTTCTGCTCTG
GATAGCCGAAACGAGATCGCCAACACTATGGGAGGTCTTTTACAGGCATCCAACTATCTT
GTCGGATGCTCTGGAGGTGGATGGCTGGTCGGCACTATTGCCATGAACAACTTCCCTACT
ATCGCTGAGGTCCGATCCAACTCTGACCTGTGGAAGATCAATGACAATGTTCCCGAGCTT
ACTAACCCTCTTTCTTGGTTGGCGTTTGGTAGATATGCTGGCATTGTTACTGCTGCCCTT
GGAAAGCGTTTGGCCGGATTTAAAATCTCTTTCACCGACGAGTGGGGTCTGCTCGTGGGG
CGAAATCTTGTTGATAAGAACGGCCCATACTCTACCTGGTCCGACATCAAGGTCACCCAA
TCTTACCTGTCCAACGAGATTCCCTTCCCTATCATTGTCGGTACCACTCTGAACAGCGCT
GATGAGCAGGAGGCTCAGATTACTATCGACAACCCTTTGATTGAGATGACCCCCATTGAG
TTCGGCTCCTTCGACAAGTCCATCAAATCTTTCTTCACTACTTCTGCTATTGGTACTTCT
GTTTCTAACGGCCAGCCCACCTCTTCCCGATGTGTCACTGGCTTCGACAATGCCCAGTTC
CTGCTGGGAACCACATCCAGTCTTTTCCAGGGTGTCAGTGGATGGCAGAAGACTATGCTG
AACATTGTTGGGGCTCTTAACGGCAACATCGCACCCAGTGCCATCTATCACCCCAACCCT
TTCAAGGATGCCAGCTCGGTCCAGGCTCCTTTCAACGGTGACTCTCTCTATGCTTCAGAC
GGAGGTTATTCTGGCATGGTTCTTCCCCTGTGGCCCCTTATGCAGCCATCTCGAAACGTG
GACTTGGTATTCTCATTCGATAACAGCGCAGGAGGTCCCAACAATGCTCCTAGTGGAGTC
ACTCTGGCTAACGTGAAGCAGAAGGTCACAAACGAGATGGGCGAAGGAGTGTTCCCCGAG
GTTCCCAGCAGCGAGGAGTACATTGCCAACTACCTTGTCAAGCCAGTGTGGCTCGGATGT
GAAGTTTCCAAGCTCAAAAAAATCCCCAACACAGATCGATACGTTCCTCTTGTCATCACA
ATGGCCAACCACCAGATCAACTACAACTCTCTTCAGCAGACTGACAAGATGGACTATAGC
TCTGATGAGCAAACTGGTATGATCTCTAACGGTTTTGCAGTCGCTTCTAACAATGGTGAC
CTGAAGTGGGCCCAGTGTGTCGGCTGTGCGGGTATTCTCCGAGAGTTCCAGAGAACTGGT
AAGGAACTCCCTGAAACCTGCCAGGCTTGTCTCAAGGAATACTGCTATCAGTACTCTGGT
TAAAAAAAAGAACCACACTCTTCTGAGTAGATTAAATTCAGTTAATAAACGCTCTGTTAT
TG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F14113g_CDS-001

Protein length: 541 aa.
Product: Phospholipase B, putative

>YALI0F14113g_CDS-001 MIANFLLLLVLVTFAAASYTPSKGSCQYDTNLLREASSISPDEANYVASKQSSSDSAFQS
YLKNVNIPGLDVNQSANIALSFSGGGYRAMLSGAGQFSALDSRNEIANTMGGLLQASNYL
VGCSGGGWLVGTIAMNNFPTIAEVRSNSDLWKINDNVPELTNPLSWLAFGRYAGIVTAAL
GKRLAGFKISFTDEWGLLVGRNLVDKNGPYSTWSDIKVTQSYLSNEIPFPIIVGTTLNSA
DEQEAQITIDNPLIEMTPIEFGSFDKSIKSFFTTSAIGTSVSNGQPTSSRCVTGFDNAQF
LLGTTSSLFQGVSGWQKTMLNIVGALNGNIAPSAIYHPNPFKDASSVQAPFNGDSLYASD
GGYSGMVLPLWPLMQPSRNVDLVFSFDNSAGGPNNAPSGVTLANVKQKVTNEMGEGVFPE
VPSSEEYIANYLVKPVWLGCEVSKLKKIPNTDRYVPLVITMANHQINYNSLQQTDKMDYS
SDEQTGMISNGFAVASNNGDLKWAQCVGCAGILREFQRTGKELPETCQACLKEYCYQYSG
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG