YALI0F14025g

Overview

Description weakly similar to uniprot|Q12494 Saccharomyces cerevisiae YDR017c KCS1 potential transcription factor of the BZIP type
Locus type CDS
Locus tag YALI0F14025g

Location

Species Yarrowia lipolytica Positions 1891518..1894702
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3185 (nuc.)
Previous locus YALI0F14003g Next locus YALI0F14047g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F14025g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F14025gYALI0F14025g_mRNA-001YALI0F14025g_CDS-001

Nucleotide sequence

 

>YALI0F14025g
ATGAGTCATCCACCACCAAGTCAAAAGCTGCCGGCAGGCCCGGCTTCGTATCTGGAGCTG
GATGTGGGCCACACCCCGATAGGCGGCACAGAAACACAGAGCGTACCGACACAGCTGCGG
CCCGTGGCCATTTCCACAACTAATGCGTCCGCAGACCCCTCATCAGCTGCGACAACATCG
TCGGGAACAACATCAACTACAAACACGTCCATTCCGACACACAACGACGCGGACGACTAC
ACCAATACAGAAGACGAATCTGGCGTGTCTTCGGCATCTTCTTCGCCACCAGACATTTCC
GGCTCGCGAAAGGCGTCCCGATCTCTGCGTCTGTTCAAGCATGAGGATTCTCGAGAACGC
GAGACCAAGAAGAGCGAACAGCGAACACAAAGCCGACCTCGCGACGAAAACGAGGAAACA
CGCATGGCCGACGTGCGCTCGAGACGTGCGTCAGTGGTCTCTGATGACAAGGAGGAGGAG
ATTTCCGGCGCGACATACTTCCCACATACCCCTGGCCAGGCTCGTCTCAACACTCTAGCA
GCTGAGCAGGCCGCAGCGAAGGCTCGTACTCGACACTACGTGGTGGAGCCCAGCATGTAC
CATTGGTCGGACCAGAATGTGCCTCTGACGGCGTTGGTGGAGCGTGGCGAGTCGGTATCG
CCACAGGACGAACAAAGCCAACCCATGGACCCCAACAAAATCAAGGGTATGGCTGGCGAG
GACGTTGGAGTGACACGCAGCAGTACCCGTGGCGTCAGCAAGACAAGAAACAAGAGCCAG
GTCCGTGATTCAGCACCAGAAACTACCAGTACAGCAGACATGACACCCGAGGAGAGGGAT
ACCAAAGCGACAAACAATGGCCAGACCAAGGAGGAGGAGGAGACGGTTGATCTGGACCTT
ACTTTGGACATGGACGATGCACCACAGGTGGAGTTGCACCTGCATGAAGATGTCATGGTT
GACGAGGCTGTCGACGATGCTAACGATCCCGACACTTCTCAGTTCCCCTTGGCAGTGGAG
CTTACGCCGTTCAAGCACAAAGTGGGTGGCCATACGGCCATCTTCCGATTTTCCAAGCAG
GCTGTTTGTAAGGCTTTAGTCAACCGAGAAAACATATGGTATGAGGCCATTGAGCTGCGC
CACTTTGAGCTGCTCAAATTTATGCCAAAGTACATTGGTGTGCTCAACGTACGACACACG
GCCCAGGTGGAGGATGACATCAATGCAGTGTCACCTATGCTTGGCGGCCTGGAAGATAGC
GAGGGAACCGACGAGAACAAAAGCAAAAGGTCGGCTGCGCCGTTGCTGACCTCAGCAGCT
CCCATCCAGACTCCTCAGCTGCGAGCGTACACTTCGCAGCCCAACATGAAGTCTCCTCAG
CTGGATCGTCAGACGAGCTCTGCTTCCCTGAAATCGCTGCAGACATGCTTGCCCGAAGTC
GTGCTGGACGACAATATTCACATCATCCCCGAATCTCTGCTCAAGAAGTACTCGACCAGC
GCCCCCAAGGAGGATGCTTCACCCAAGAGTCTAGATACCCCCACCTCTCCATCTTCTCTG
GGCAATCTCCACAAGTCACCTGTTATGAGAGTCATGCATTCCCCCGAGTCTCCGGCAGTG
TCGTGGGGAGCTACAACTGTGAACCAGAAGCTACAGGAGTTGGTCCTCGCTGAGGTATTT
GCTCCTCGACGCGATTCTCCCCGTACCCATTCCACCAGCCGAATCACGGGTATCCCTACC
TCGCAGCGAACACATCGGTTTTCCACATCATCAGCCATCAACACACTTCGACCCAAGTTG
CAGCATCCCATTTCATCACACCATAGCATGAGCGACCTATCTTTGGCAGAGCTGCACAAC
TCTTCTGACAACAGCCACACATCGTCTCTGCCCAGCAGTATGTCCACGTCGGCCTGCCTG
AGGTCTCCCCTAATTAAGCCTCAGCATCCCAAGTCGGTGTTCTTCGACACGTCTCCTCGA
GTGAAGGCTTCTCGAGCTGAGTCTGTCGTTTCTATCGAGGAGGAAGTGGAGGTGGAGAAT
AACCGAGGAAGTGATGGTGACGTGTTCGAAATGGATGGCGTCGACGGAGTTGATGGTACT
AACAACACAATTGCCCTGTCACTCAGCAACCCTGCCCTGGCAGCACTCAGCACACCTAAC
AGCACCACTAATCTTTCGCCTGCACCAGTATCTCGTTCAGCGCTTCCTGTTATTGTGCAC
GCCTCTCCTGGACGAATTTACACTCGTACCGAGCGGTTTATCCTCCTTGAGGACCTCACC
AATGGCATGAACAAGCCTTGTGTGCTTGATCTCAAAATGGGCACCCGACAATATGGCGTT
GATGCAATTCCCAAAAAGCAGAAGTCTCAGCGAACCAAGTGCGCCAACACCACTTCCAGA
GCCCTGGGTGTGCGAATCTGTGGTATGCAAGTCTGGGACATTCCGTCTGAGGAGTACATT
TACCAGGACAAGTATTTCGGTCGAGCTGTTCGAGCTGGACCTCAGTTCCGAGCGTGTCTT
GGAAGGTTCCTGTACGATGGTCTTACCAAGGCAAGTGTGTTGAGACACGTTCCTGCTATG
ATTCGCCAACTCAACGAGTTGCAGGTGATCATTGCCAGTCTCAATGGGTACCGGCTGTAC
GGGTCCAGTTTGTTGGTCATCTACGAGGGCAAAGAAAAGGAGGAGGAGGAGCGTGATAAG
AAGAAGGAAACCAACAAGGGCGGCCTTCCTCCCACCACCATTTCTCTGCGAATCATTGAC
TTTGCCCAATGCATTACAGGTGAAGACAAGCTGCCTCCCAACACCAACGTGCCGCCTCAT
CATCCCGAGTCTCCTGATAAGGGTTATCTGCGAGGTCTTCGTTCTCTGAAAAAGTACCTG
CGAATCATTTGGCGCAAGCTCACTGGCTTTGAGTTGGACGAGTACTTACAGCTCCCTCCT
GATGACGCGGCTGCTCTTTTGGACAAGGCCAGGATTTACGAACCCATTCCCGCATTGCAC
GATTTTGACATCGAAAATTTCAGCGTCTCGGAGGAGCCCGAGTTTCTGGATTACATGGCG
TACAATGTCACAGCTACGCTGAGTCCTTCTACTTTGGGCTTTGTCTACGACGATTGTACC
GATTCAGATGTCAGCGACTAATTATAATGATTAAGTATATAATGTATATATTGCATGTTA
ATGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F14025g_CDS-001

Protein length: 1047 aa.
Product: Conserved hypothetical protein

>YALI0F14025g_CDS-001 MSHPPPSQKLPAGPASYLELDVGHTPIGGTETQSVPTQLRPVAISTTNASADPSSAATTS
SGTTSTTNTSIPTHNDADDYTNTEDESGVSSASSSPPDISGSRKASRSLRLFKHEDSRER
ETKKSEQRTQSRPRDENEETRMADVRSRRASVVSDDKEEEISGATYFPHTPGQARLNTLA
AEQAAAKARTRHYVVEPSMYHWSDQNVPLTALVERGESVSPQDEQSQPMDPNKIKGMAGE
DVGVTRSSTRGVSKTRNKSQVRDSAPETTSTADMTPEERDTKATNNGQTKEEEETVDLDL
TLDMDDAPQVELHLHEDVMVDEAVDDANDPDTSQFPLAVELTPFKHKVGGHTAIFRFSKQ
AVCKALVNRENIWYEAIELRHFELLKFMPKYIGVLNVRHTAQVEDDINAVSPMLGGLEDS
EGTDENKSKRSAAPLLTSAAPIQTPQLRAYTSQPNMKSPQLDRQTSSASLKSLQTCLPEV
VLDDNIHIIPESLLKKYSTSAPKEDASPKSLDTPTSPSSLGNLHKSPVMRVMHSPESPAV
SWGATTVNQKLQELVLAEVFAPRRDSPRTHSTSRITGIPTSQRTHRFSTSSAINTLRPKL
QHPISSHHSMSDLSLAELHNSSDNSHTSSLPSSMSTSACLRSPLIKPQHPKSVFFDTSPR
VKASRAESVVSIEEEVEVENNRGSDGDVFEMDGVDGVDGTNNTIALSLSNPALAALSTPN
STTNLSPAPVSRSALPVIVHASPGRIYTRTERFILLEDLTNGMNKPCVLDLKMGTRQYGV
DAIPKKQKSQRTKCANTTSRALGVRICGMQVWDIPSEEYIYQDKYFGRAVRAGPQFRACL
GRFLYDGLTKASVLRHVPAMIRQLNELQVIIASLNGYRLYGSSLLVIYEGKEKEEEERDK
KKETNKGGLPPTTISLRIIDFAQCITGEDKLPPNTNVPPHHPESPDKGYLRGLRSLKKYL
RIIWRKLTGFELDEYLQLPPDDAAALLDKARIYEPIPALHDFDIENFSVSEEPEFLDYMA
YNVTATLSPSTLGFVYDDCTDSDVSD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG