YALI0F13585g

Overview

Description weakly similar to uniprot|Q12242 Saccharomyces cerevisiae YOR138c
Locus type CDS
Locus tag YALI0F13585g

Location

Species Yarrowia lipolytica Positions 1817244..1819208
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1965 (nuc.)
Previous locus YALI0F13563r Next locus YALI0F13607g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13585g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13585gYALI0F13585g_mRNA-001YALI0F13585g_CDS-001

Nucleotide sequence

 

>YALI0F13585g
ATGCGCACGTTTCGAAAGTCGGTAGTACGCAAGACAAAACGCCTGTTTGACCACCAGGGG
ACGTCCAAAAAATACATTGACGACACTACCGACATGTCTCAGATCCAGCAACTGATTGAA
ATGGGCATCAGCGAGGATGTCGCCAAGATTGCGCTCCGCAGAAACGACCACAACGTGGAG
AAGGCCCTCGAATACATTTTTTCGCACGACAACATTGTGGAGAGCGATAACGAGGTGGCT
GCGCCCGAGCTACCGCCGCGACGAGACCCCAACGCAGACACCAGCGGAGATATCGAGCCC
AGGGACTACACCCGGGAGATTGTGCCTTACCACCAGATTCCACATGTTGAGGAGACGGCT
GAGGAGGACCTAATTGAGGAGAGCAGAGAGGCGTACGTACATGAGCCTGAGCTTTCATAT
TCACGGTTCGATCTCAGTGAATTGACAGCAAACCAGACGGTTAGAAGTTTGGATCCTCCA
ATCTTGCTACCTTCTCATGCTGCCATCGATATCGCGCCCTTGCTGACGATTTTGCATGCT
ATTCCACAGGCCAGAGATGCGCTATTGGAGGGTGCAAAGGACACGTACGAGTTTGACCCC
AGCTGGCGCTCCGGCACCTGTTCTAAAAAGACGTCGTTGGTGGAGGAAACACAAAAGCTG
CTCGCATTTCTCGATGGCAGCACCGGGCGAGGCTTCAACACCATCTCCAATCTCGTCAGA
TGCATCCCTTCATCTATAGCATCCCAACTCAGCGGCTCGTCTCGATCTAGTGACGACTCT
ACTGCGGTTGGTGCGTTTTTGGAACAACTCATCATGCGGCATGAGAACGCAGCGAAAACC
TTCAGGATGGTGGCTACGGATGGAGAGGAGTCGGAACCTATGTACAACATCTTGCTGGGA
ACCAGGGAGCCTTCAGACACTTGTCTCACCATTTCCGACGGACTAGATTTGTTGTTATGG
AGTGGACTCCGAGATGGATCTTCTACAGACGAAGTGACCTATCTCAAGGAAATCCCACCT
GTTATCTCCATCACATGTCGACGTGAAGACGCCCAAAGTGGTTCTGGTCTGGCTGTGACG
CCAAAGTTCTCTCCTCATCGGTACTCGGAGGCCTACCTGGACAAGGTCAAGTCGGTGCAC
AGTCGAGCCATTGAGGCCAAGAAGGAGTCGCAAGCGCTGTTCCAGAAGCGATTTGAAATG
TCAAACTTCCAGGGCGTCAGTGTTACTAAGTTGCTGGAGGTTGCTGTTGGTCATTTCGAC
GATGAGACCAGGGAGGGAGTCACAGAGCTACGAAAACTCCAGAATCAGTACCTGGATGCT
CGAGAGGAGATCGGATTACGAATCGATAAGCTTGAGGAATTGACGGACGATGTGGATGTG
CCTCCATATGGGCCTGAATACAATCTCATGGGTGCCATCATTTCCCCAACAGAGTTTTAC
TACAACCATCATGGACAATGGCTACATGTGGCTTATCTGGACGAAGCTCCCGTATCTGTG
GATAGTCTTTATGCAATCCGTCCTACTACGGTAGAGGAGGTTTGTGAGCATGCTGCCCGT
GGCTCCGACCAGTTTGATGCCCAGGAAGTGACTCTGTTGTATGCCACCTCCGAGAACAGC
GATATGCCTTGTGGGGAACTCCCGGCATCTCTCAAGGCGTTCCTTGAGGAGGATCGGAAG
CATTTCGAGGCTCTTCTGGCAGAGGAGGAGGCTGCTGAGGCTGCGGAGGCCGAGAATCTC
ATCGAGCTAGATGCGGAAGATTCCGATGAGCAGGAAGTTGGGACGGAGGATACGGCCGAG
GATGAGGCACAAGTGCAAGAAACGTCGCAAGCCACTGAAGCTAAGGGGCCTGATGGTTTA
GAGGCTTTAGAGCAGCCACAGAGATAGGCGCCGCAAAGATAACAAGGTCCGATCATGTCT
CTGTTTCTGCCACTAATTTAGATAAATGAATGAACGATGGCATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13585g_CDS-001

Protein length: 629 aa.
Product: Conserved hypothetical protein

>YALI0F13585g_CDS-001 MRTFRKSVVRKTKRLFDHQGTSKKYIDDTTDMSQIQQLIEMGISEDVAKIALRRNDHNVE
KALEYIFSHDNIVESDNEVAAPELPPRRDPNADTSGDIEPRDYTREIVPYHQIPHVEETA
EEDLIEESREAYVHEPELSYSRFDLSELTANQTVRSLDPPILLPSHAAIDIAPLLTILHA
IPQARDALLEGAKDTYEFDPSWRSGTCSKKTSLVEETQKLLAFLDGSTGRGFNTISNLVR
CIPSSIASQLSGSSRSSDDSTAVGAFLEQLIMRHENAAKTFRMVATDGEESEPMYNILLG
TREPSDTCLTISDGLDLLLWSGLRDGSSTDEVTYLKEIPPVISITCRREDAQSGSGLAVT
PKFSPHRYSEAYLDKVKSVHSRAIEAKKESQALFQKRFEMSNFQGVSVTKLLEVAVGHFD
DETREGVTELRKLQNQYLDAREEIGLRIDKLEELTDDVDVPPYGPEYNLMGAIISPTEFY
YNHHGQWLHVAYLDEAPVSVDSLYAIRPTTVEEVCEHAARGSDQFDAQEVTLLYATSENS
DMPCGELPASLKAFLEEDRKHFEALLAEEEAAEAAEAENLIELDAEDSDEQEVGTEDTAE
DEAQVQETSQATEAKGPDGLEALEQPQR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG