YALI0F13079g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F13079g

Location

Species Yarrowia lipolytica Positions 1753613..1755407
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1795 (nuc.)
Previous locus YALI0F13068g Next locus YALI0F13101g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13079g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13079gYALI0F13079g_mRNA-001YALI0F13079g_CDS-001

Nucleotide sequence

 

>YALI0F13079g
ATGATTTCATTGCCGCCTGAAATCATAGGCAAAATCATCAGGCTGCTCGACCCGGTCTCG
TTTCTGTACATTGGCCAGACGTGCAAGTTGCTGCGCGTTTTTTCCCGCAATGATACCGTG
CTGACTGACCATCTCCAGACCCTCATGAACTGGAGAGGAAACGACGACGAGACACCCGAA
GACGATGGAGAGCAGACACAGACACAGTCGGAGGACAACGACGACTCCGAACAGCTAACT
ACAACATCGCCGACGAAAACGGTGACTCCGGCTCCGCCGACGACTTACACAATCGATCTG
TCGTCCACCCCACTATACTCCACCTATCTTAACTTGCTGCGGCAGAAATGGGTTGCTCGT
CAGATGACCCTCAAGATCCACCTGAGGCTGTCGCCGGACTGCAGAGATACGTTTGCGTCG
AGCTGGTCTTCTCCAGACGGCTCTCTGCTGTGTGTCTCGCTGGGGAAATATATTTTTGTC
TATTCGATCGGAAGCGAAAAGTTTTGCAACAACATCCCGCCGCTCTACCTGTTTGGCTGG
AAAACGGAGGAAGAAATTCCGCTGGTCACCTTCTCCACCGATAGTGAATACATGGCCGTG
GTGTTTGGGTTCGGAAGAGTGCGGTTATATTGCATGGAGGAACTGCTGTCCAAGTACAGA
GGCGGCATCATTAACCTGGCCAACGTGCCGGCCAAGTACTCGAAACAGTTTCCGTCCCGG
ATCGAGTATCTGGCCGTGTCTCAGAAGGCCTTCATCATGTGGGTCAGAGCCAGGCGTCTG
GGTGGACTCACAATAATCAATGTTGAGACCACAAACGAGATTGACGTGCCACATTTCCGT
CTAGATCTCCGAATGTCGGCCCAGGCCCGTGACCAGGTCATGACACTGATTGGAAACCAG
GAGGCTCTCATCTTCGGACAGGCAGATACTCTGGACGAGGAAGATTTTACTGAAGAAGGT
GCTCTGTGGGAATACTACTGCACGCTTATGGAAACAAGCATGAGCACAAGTCTCAGTTGC
GATGGAGTGCTTGCATTACTTACTCCTGGTCGCTACATTTGTGTCAAGCACCTACCGGAC
GAAAATCGCGCCCGTTTTGCATTAGCTACCGCTGAACTGGGAGTGACGGGCTCGCCGGAA
GAGGAGCTGTCGGAAGATGAGGAGGATGACGATCAAAGAGCCCTGCTGTACATTAGTAAT
GTCAACTCGAGGGAAGACTTCAAATCCATCAAGTACTGTCTCTCCTGGGACTCCACAGCC
ATGGCCGTGTACTACAGACAGAGGATATCAATTATTCCCCTCAGGGGTATAGTCGAGGAC
CAGGTGCGTCTTCCTGTCAGTATGCCACCACGTCAAGTTCTTACAAGGGCAGGAGTCGAG
CCTTTGGCTATGCAATACATTCAGAGCGACCGAATCATGTGTGTCTATGGATCGTCAGTT
GAAGTGTTCCATCTCAACAGTTCAGCACATCCTCGCCACCCCCAGCATCAGGATGTGTTC
CATTTGGCATCCAATCAGAATCCCCCAGCTCCCCCCGTTCCTCTGGACACGTTTGTTCCA
CAGATCAACCACACGTGCGGTTCGATCCTGTATCATCTATGAGATTACGGGAGCGAGGGA
GAATCTGGTAGTGCGCATGAGACTGCCCAGGTCAGCCCCGCTCCACCAAAATCGGAGGAG
GACAAGAGTCCTCTAAAGTAGCTGAGGATTATATGGTTCAGCACAGAGAATAGACAGACA
TTGTATAATGTTGCCTGATTAATAGATAGTGATTCAGTCACTGCGATGAAATTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13079g_CDS-001

Protein length: 534 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F13079g_CDS-001 MISLPPEIIGKIIRLLDPVSFLYIGQTCKLLRVFSRNDTVLTDHLQTLMNWRGNDDETPE
DDGEQTQTQSEDNDDSEQLTTTSPTKTVTPAPPTTYTIDLSSTPLYSTYLNLLRQKWVAR
QMTLKIHLRLSPDCRDTFASSWSSPDGSLLCVSLGKYIFVYSIGSEKFCNNIPPLYLFGW
KTEEEIPLVTFSTDSEYMAVVFGFGRVRLYCMEELLSKYRGGIINLANVPAKYSKQFPSR
IEYLAVSQKAFIMWVRARRLGGLTIINVETTNEIDVPHFRLDLRMSAQARDQVMTLIGNQ
EALIFGQADTLDEEDFTEEGALWEYYCTLMETSMSTSLSCDGVLALLTPGRYICVKHLPD
ENRARFALATAELGVTGSPEEELSEDEEDDDQRALLYISNVNSREDFKSIKYCLSWDSTA
MAVYYRQRISIIPLRGIVEDQVRLPVSMPPRQVLTRAGVEPLAMQYIQSDRIMCVYGSSV
EVFHLNSSAHPRHPQHQDVFHLASNQNPPAPPVPLDTFVPQINHTCGSILYHL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG