YALI0F12529g

Overview

Description weakly similar to uniprot|Q04179 Saccharomyces cerevisiae YDR400w URH1 uridine ribohydrolase
Locus type CDS
Locus tag YALI0F12529g

Location

Species Yarrowia lipolytica Positions 1671631..1672906
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1276 (nuc.)
Previous locus YALI0F12523r Next locus YALI0F12551g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12529g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12529gYALI0F12529g_mRNA-001YALI0F12529g_CDS-001

Nucleotide sequence

 

>YALI0F12529g
ATGCCCCGATCGCTCATCATCGACACTGATCCCGGCGTGGACGACGCGCTGGCCATCTCG
CTGGCTCTCAACTCGCCCGAGTGCGACCTCAAGCTCATTTCTCTGTGTTTCGGCAACTGC
GACACGAACGCCAGTCTGCGCAATGTGGAGACACTCTTCAGCGTGTTTGAACGCGAGCGA
GTGTGGCGAGAGCAGCAGGGTCTGCCCGCCAAGCACCACGTGAACCAGAAACCCATTGTG
GCTGTCGGAATGGACACGGCGTTGGACGGAACCCGACTGGACGCTACCTACTTCCATGGT
GACGACGGACTCGGTAACGTGCACACCAAGATGCCCGAGTTCACCAGCACCGACAAGAAC
GGACCCGGATACACGTTTTCCGACAAGCCTTCGTATCAAGTCATTCTCGACCTGCTGCGT
GAAGAGCCCGACAAGTCCGTGACGATTGCGGCCATTGGCCCGCTCATGAACATTGCCCGA
GCGGCCCAGATTGATCCCGACACCTTTTCGCGGGTGAAGGAGATTGTTCACATGGGCGGC
GCTCTCAAGGTGCCTGGAAATGTGACTCCCCGTGCTGAGTTCAACTGTTACTCTGACCCC
CTGGCTGCGGCGGTGGTGTACTCGTTTTCGGCCACTGAGCAGCCCTGTGTGACTTTGCCT
CCTCGAAAGGAGTTCCACGTAACGCTTCCGCGACCTGTGCCCGTCACAATCTTCCCTCTG
GATATTACCATGGAGTACAATCTCTACGAGAACCAGTTTTTCACCGCGGTTTCCGACCGC
GCCGCAGCAGGCTCTCCTCTGACGGTGTGGTCGTCGGTGTGGCTCCAGTCCACCTTTGAC
ACCTTCCGTCGACTTAACGTGGACTGTTCTGACGTCCATATCAACATGCATGATCCCCTG
GCCACCTGGTACGCCATTTGTGGAGATGAGCATGGCGCCTGGGAGTCACACGACCAGGAT
GTCCGTGTGGAAACCGAGGGACAGTGGTCCCGTGGGGTAACTATTGAGGACGACCGCGGC
CGACAAAAGACGGATGCCGAGGCCGAGGACGACGGAAAGTGGCTGGGACGAGGAGGAAAC
CATGTCAAGGTGGTGACCAAGGCGCCAGTCGAGGTGGGCCAGTTGTTGGTGGAGCGGATT
TACGTGTAATCCGGGAGTGAAGCGAGCTGATAGATGAGTCGGAGCGACATGGCACTGTCG
GAAGTCACCACCAAGTTTAGAGCTAGATATAGATGATAGACGGATGTAGAGTGAATCGAT
GGGGTTTCTGGTTTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12529g_CDS-001

Protein length: 383 aa.
Product: Conserved hypothetical protein

>YALI0F12529g_CDS-001 MPRSLIIDTDPGVDDALAISLALNSPECDLKLISLCFGNCDTNASLRNVETLFSVFERER
VWREQQGLPAKHHVNQKPIVAVGMDTALDGTRLDATYFHGDDGLGNVHTKMPEFTSTDKN
GPGYTFSDKPSYQVILDLLREEPDKSVTIAAIGPLMNIARAAQIDPDTFSRVKEIVHMGG
ALKVPGNVTPRAEFNCYSDPLAAAVVYSFSATEQPCVTLPPRKEFHVTLPRPVPVTIFPL
DITMEYNLYENQFFTAVSDRAAAGSPLTVWSSVWLQSTFDTFRRLNVDCSDVHINMHDPL
ATWYAICGDEHGAWESHDQDVRVETEGQWSRGVTIEDDRGRQKTDAEAEDDGKWLGRGGN
HVKVVTKAPVEVGQLLVERIYV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG