YALI0F12287g

Overview

Description some similarities with uniprot|G8YCE2 Millerozyma farinosa PISO0J10239g
Locus type CDS
Locus tag YALI0F12287g

Location

Species Yarrowia lipolytica Positions 1625316..1626750
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1435 (nuc.)
Previous locus YALI0F12254r Next locus YALI0F12320r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12287g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12287gYALI0F12287g_mRNA-001YALI0F12287g_CDS-001

Nucleotide sequence

 

>YALI0F12287g
ATGTACGACTTTCTGGTGCTCCCCGAGTTTTCCGAGTCCGACTTGGACCTGGGATACGAC
CATTCCAACGTGGCCAACGCCTTTCCCGAGCAGCTCACCGACTCCATAGGTGGCAACACC
TTTGCCGGGTTGTTGGACACAGATGTGAGAGAGAGAGGAAGAAACGAGAACGACACAAAC
ATGTTTGGAGTCACATCTCTCGACTCAGCTCCGGTTGCCCTCGACTCAGCTCCTGTTGCC
ACCGACTCAGTGCCTACCTCCGCCACCACCACCTCCTCCACCGACTTTTTTCCGTACTAC
ACATACGACTCGTCCGCCATGGCGATTGATGACGTGGTGTTTCCCGCCATGCTGTCGCCG
TCCATGTCTTCGGAGGGCACGTCGCCCACGCTCATGTCGTCGGACTCGCTGTTCGATCAG
TCGTACGACTTTGACAAGTCACAGACCGGAGGTGGAGTGACACAGAGTCTAAGTGGGGGA
GTGACACAGAACCACGGAGTCACACAAAACCAAAGCCACAACTCCAAAGACAAGGATCTC
GAGCTCGACTCGTTCATGCCAATGTCTTTGCGTCAGCCTCTCCATGTGTCTCCTCTCCAG
ACGTCTCCTCTCCAGACGTCTCCTCTCCAGACGTCTCCTCTCCAGACGTCTCCCCTCCAG
ACGTCCCCCATTGCCTGCCAACCGACCCCCGTCCATTCCCGCTCGCAGTCCTACTCTCTT
CCGTACGATCCTGCCCCCGCACTGATCAACGGCAATCATACCCAGCAGTCCCACAACCAC
GTCGCAGGTGGTCACCACTCCCACAACCACAACCACAACCACAACCACAACCACAACCAC
AATGCTGGCCACTCCCACAATGTCGCCTCCAACAACCCCTCGCCAGACTCGTCGGAGTGC
GAGTCTGATGACGACGAGGAAGAACTGTCGCTGGACGACTCTCCCTCGGCCCACGGCGTG
CTGTTCAAAAACCTGTCGCAGGACGAACAGACAAAGTACCGCAAGTACCACTGCCCCGTG
TGCAAAAAGTACTTTCGCCGGGACCTGCCGCGCCATCTGCGCATCCACCAGCGCGTGGCG
CGGTTTGTGTGTCCCTACCCCCGGGACCAATGCTCGCACAAGCGGGGCCAGTTCAACCGG
CCCTACGACTACAAGAAGCACCTGCTCCACTCGCATTTCCAGTTTGACGAGGCCAAGCTG
GTACGTGGGTTCCGCGACCTCAAGTCCAAGCTCAGCCATTACGGCACCTGCAACTGTGGT
CGTCGGTTCCGCGCAGACAAGTGGCTGGATGACCATGTCATGAAGTGTCTCAAGGAGATG
AATTAAGGGGAGGCACACTCTGTCTACACTTTTGACCCTATATTTGCACTCATACAGGTT
TCCAGATAGGACTATTTATTGTATATATTTATCGAGCTAGACTTTATGTGTTTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12287g_CDS-001

Protein length: 442 aa.
Product: Conserved hypothetical protein

>YALI0F12287g_CDS-001 MYDFLVLPEFSESDLDLGYDHSNVANAFPEQLTDSIGGNTFAGLLDTDVRERGRNENDTN
MFGVTSLDSAPVALDSAPVATDSVPTSATTTSSTDFFPYYTYDSSAMAIDDVVFPAMLSP
SMSSEGTSPTLMSSDSLFDQSYDFDKSQTGGGVTQSLSGGVTQNHGVTQNQSHNSKDKDL
ELDSFMPMSLRQPLHVSPLQTSPLQTSPLQTSPLQTSPLQTSPIACQPTPVHSRSQSYSL
PYDPAPALINGNHTQQSHNHVAGGHHSHNHNHNHNHNHNHNAGHSHNVASNNPSPDSSEC
ESDDDEEELSLDDSPSAHGVLFKNLSQDEQTKYRKYHCPVCKKYFRRDLPRHLRIHQRVA
RFVCPYPRDQCSHKRGQFNRPYDYKKHLLHSHFQFDEAKLVRGFRDLKSKLSHYGTCNCG
RRFRADKWLDDHVMKCLKEMN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG