YALI0F12243g

Overview

Description some similarities with uniprot|P47115 Saccharomyces cerevisiae YJR056c hypothetical protein
Locus type CDS
Locus tag YALI0F12243g

Location

Species Yarrowia lipolytica Positions 1615591..1618124
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2534 (nuc.)
Previous locus YALI0F12221g Next locus YALI0F12249r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12243g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12243gYALI0F12243g_mRNA-001YALI0F12243g_CDS-001

Nucleotide sequence

 

>YALI0F12243g
ATGGACAATTTAAAATCGCTGGGAAAAGGTCTTCCTGCGACCGCGGTGGACACGTCTCTG
GCACTGGAGTTCCGCAACGCCGCCAACGCGGTCACCAAGCTCTACAAGGTGTCCAACGAA
AAGGCCCAGGTGGCGCGCCACGAAGGGTACAAACAGTGCCTGTCGGACGTGCTGGGGTTT
CTGCAACAACATCAACAACGTCACGTGGACGGTCTGCGACGCGAAAGCGAAAGCGAGGGC
GAGTCCGGCGACCTGGCCCACGAGCTGTGGAAATGGGTCACAAAACAGGAGGAACGGTTG
GACGAAGATGACACAAATACAATCACGAATACGACAACGACTGCGACGGCGACGGCGACT
GCGAATACCAATACAGGAGGAAACGCAAATACAAACCCAAATGCCACGTCATCAACAACC
GCCCCAAACCCCACGGCTGCCACAAACACAAACATAAACACAACCAGCTCCCAGGCTCCG
CACGACACAGACGTGTTCCGAATGGGCTTCACGCCCTTCTCCTTCTCACAGGACCTTGTT
TATCCAGGCTATGCCGCCGTCAAGAGAAAGGGACATGCGCATGGTCATGTGTATCATTGT
GACGAGGACAGTGATGAGGACGAGGGAAGTAAGAGGATGCGGTTGGTATAATTCTGTATA
AGACGAGCTCAGTGAGTCTTATATGTCGAGGGGATCTTCTAACAGTCGAGGAGATTCTAT
ACAATCGAGGGGATCCTATACAGTCGAGGGGATCTTAGGATCTTAGGTCAGTCGAGGAGA
TCTTATATCAGTCGAGGAGATCTCGTGCTAGTCCATCCGGATGTCACTAGTCCAGCAGAT
CTCAGTTCCACAGGTCTGCGACACTCACATATTAAAGAAGGTGACTCGGAAGCCTCAGTC
TCGTCCCCTCTCAGATTTGCTCTGAGTGGAAAACCCACAGCTTGTTTCATTACACCTCGT
CACATCATCCTCGTTACAACATTCTCACACCACTACACTCACGCACTATCGCCGCACCAA
CACATGATGTTACACTCAGTGGCCCGTCTACACAACTAACTATAACTACCGCGTCAGTGG
CTTTTGCTGACTGTCTGAGCAGTGCCTGGTCAACACAACTACCGCACCAGTGGCACTGCT
GAGTGTTTGCGCGACGCTCTTTTCGACAGATGGCACGGTTGTGACGTACCCCGAACAACT
CACCATATCCAACTTTCAGCATCTAGCATCAACATCAGCACCAGCATCAGCATCCATAGC
ATTAATAGCATGTCATTTTTTATGGGGAGAGACGATAGATAGGGCGACAGGAAGAGAGGG
AGACGGGCAGTCGACTGATGTTCGTTTGTCGGTGGTTGCCACAACTGCAGTTGCCCGGGT
GGGGCACTGTACACCTACAAGAGCCGGTACTCTTACTCTACCATTCCTGCAATCATGCGG
CGTATACTTGTGGCAAGTGGGGAGGTGACAGGGGTTGTGGATGTCGCAGCCTGCAGCCCC
GCTTGTCGTCGTTTTCCGTCGTTTGTCGTCGCTTGTCGTCGAATCTTTGTTATCGACTAA
GTTGACTAAGTTGACTAAGTTCACTACAATGGTGAGTTTGAGAGCTTGTTTGGTGCGACC
AGGCGCGGGACGTTATACATAGTCGTACGTACTTGTTCTTGTCTACCATGTCTCATGTCG
ATCGCGCATGTACGAGGACCAGAGAGGAAGTTTTTTGTTGGGCGGTTGGGTGGGCAGAGC
CGAGTGAGTTGAGTTGGGCTGAGAGTTGGGTTTAGAGCGGAGTTTGAGGTTCAGTGAGGT
ACGGCACGGTGCTGTACGGTGCGGTTCGTCCGGTGGCCAACTTGTGGCTCTCTCTGCCTA
CACCAGTACAGTAGTCAAGTCCGCTGGGGGTTTCAGTGGTAGACTGATTTTGATTTTGAG
GTTTCAGCGGTATACTGATTTTGGTTTTGATTTTCACGAGTCCGGGTTGGGGGGTGGCTT
GGACCGGTCCAGACGAGGTTGACGGCGATCATCAGATAGTGAATGCATTACGGTGTATAA
TGGCACGGGTTCTAGTGTATATAGGCCGAGATTGTAGTTAGAAGAGTCTACATTTTTGTC
CAAAAATCCTGTTAGAAATCTTTAGAAACCATTTTAAAAGTCCCCATACCGAGTAGACTT
AATTTTGAAAAATTTGTGGAGATGTAAAGGTATGTCTAAAACGGAAGGTTTCCACGCAAT
CGACACGGGGACTTCGGTTTCGGAACCGGCTCGTCTCTGCGAGCATTTTGGTACCCTTTT
TGGCGCTCCACGTCAAGTAGTGGAAAAGTTGGGTGGGCATTACGGTAGGTACATGGTACA
TATAGAGGAGTTTTCGGAGTAAATTGTGGCTCAATGGATACAGGTGGAGGGGTTGAGAAG
TTGAGAAGTTGATGGAGACAGATATTGTGGTCAATTCCGTCAACTCCGCTTTCCATTTAC
GCGTTGCAATGCTATCGGAAGTGGTAGGCGTTGTCGTGAAAGTGTGTAGTTGGTGGGAGA
ATGCAGCCGAGATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12243g_CDS-001

Protein length: 217 aa.
Product: Conserved hypothetical protein

>YALI0F12243g_CDS-001 MDNLKSLGKGLPATAVDTSLALEFRNAANAVTKLYKVSNEKAQVARHEGYKQCLSDVLGF
LQQHQQRHVDGLRRESESEGESGDLAHELWKWVTKQEERLDEDDTNTITNTTTTATATAT
ANTNTGGNANTNPNATSSTTAPNPTAATNTNINTTSSQAPHDTDVFRMGFTPFSFSQDLV
YPGYAAVKRKGHAHGHVYHCDEDSDEDEGSKRMRLV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG