YALI0F11693g

Overview

Description some similarities with uniprot|Q9PTY5 Xenopus laevis RanBPM protein RANBPM gene
Locus type CDS
Locus tag YALI0F11693g

Location

Species Yarrowia lipolytica Positions 1542815..1544710
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1896 (nuc.)
Previous locus YALI0F11671g Next locus YALI0F11715r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11693g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11693gYALI0F11693g_mRNA-001YALI0F11693g_CDS-001

Nucleotide sequence

 

>YALI0F11693g
ATGACCGACGCCAAACCGCACAATCCCAAGTGGATCCCCGAGTACCTGCTGGAAACGGCC
TTTTCCGAGCGCTACGGTTACACGGAGGACGACGTGGCCCAGGCAGCGTCTGTTTCCGGT
GACCTGTCCTTTTTGCGAGGCTGGAACGGACCCCACAAGACCAGAAACACAAGCACAAAC
ACAAGCACAAGCACAAGCAACGGCAACGCGGGTAACGCGGACAACGCGGACAACGGAGGA
GCTAAAGCCACAGACACCTCTTGTCCAGCCCCAGTCTCGTCGGCCAACATGCTGGAACTG
CATCAGCAACAGGACCACAAGCCCATCTCTCTGCCCAAATTGCCGACCATGTGGATCCCG
GCGGTGGACTCCATCAACTGCATCCGAGACGAGCTGGAAATCGACACAGAAACGGGCGAC
GACGACGGCAAGGACGAAAACGTGGTGTACAAGTCGGACGCCCCTATCCCCCGAGGCTGT
GGCGTCTACTACTACGAGGTGGAGATTCTGTCGGCCTCCAAAGACTCGGCCGTGTGCATG
GGTTTCTGCAAGACGAGTGCGCCGCTGACCAAACCGCCGGGCTTCGAAACCGAGTCCTGG
GGCTACCATTCCGACTACGGCAACGTCATGTGTTGCCAGGGCACCTCCAAGGACTATGGG
CCGTCTTTCAACCAGCCAGGCGACGTGGTGGGCTGCTGCATCAACTTCAAGAAGCGCGAG
GCCTTCTTCACAAAGAATGGCATGCCGCTGACCAAGGCGTTTTCGGATCTCCCCTCAGAC
CCCCTCTACCCCGCCATTGGCGTCAAGAAGAAGTCCACCAACTCGCCCGGCGCACGCATC
AAGGCCAACTTTGGGGGATCGGGTCCGTTTGTGTTTGACATCAAGCAGTACGTGCTCAAA
CAGAAACACGAGACGCAGAAACGCATCGAGTCCAGCACAAAGGTGCCTGCCCATGCGGCT
CGAAACGCATTCCAGGAAAAACAGCTCGCCCAGGGAAACCTCAACCCGCTCATCAACAAC
CTAGTCATGTCGTACCTGACGCATGTGGGCTACGTGGACACGGCTGAGGCTCTGTACCGC
GATGTGTGCAGAGACCAGGATATGCAAGACGAAGGGACCGGTGGAGGCGATGTGAGTATG
GAGCCTCCTTCCGATGAGGGACTCAAGTCGCTAGCGTCATACCTTTCTCCAGACATTACC
ATCAGGCACCAGATCCGCGGTCTGATTCTGTCGGGCGACATTGACGGCGCCATGGCTCTG
GTGGAGGAGCATTACCCGACCGTGTTTGAGTCTCAGGATATGGTGCTGTTCCAACTCAAG
TGCCGTAAGTTTGTGGAGCTGCTGCAGGCCAACGAGGTGATTGAGGCTGTGGAGTATGGC
CGGGAACTCAAGATGGAGTACGCCAACGACCCCCGCCCACAGGTGCAGGATTTGTTGCGT
CACGCCTTTTCGCTGATTGCCTACGATTCCGATCAGGTGAACGAGGAGCTCGACACAGTC
AAGTCACGGGAGGAGCTATGGGAGCAGCTGTCGTCGGCCATTCTGGTTGCCCATGGACGG
TCGCCCGTGGCGCCTCTCAAGCGCATTGTTCAGCATACGCGGCAGATGATCAAGGTGTTG
GGGGAGAGTGGAAATGACACTGCGAGTTTCTTGAACGTGACGAGGGATTTTATGTAGCGA
CGATGATGTCGTGGAGGGCGGGGATGGAGGGCCTTGAACTGTCTTGCTACAAGGTGGGGT
GGTTTCCCGGAAGTGTCTCACCCAGTCACTGGAACCATGGTACGTTTCGTTTCCGAACTC
GCAGCAGGTGATTGTGGAGGAGCATTTTTATACGTAATGATTAATGTGGTTTGCTTGTGG
CTGGAGAAAACAGCCATGAGGTAGGATGAAATTGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11693g_CDS-001

Protein length: 559 aa.
Product: Conserved hypothetical protein

>YALI0F11693g_CDS-001 MTDAKPHNPKWIPEYLLETAFSERYGYTEDDVAQAASVSGDLSFLRGWNGPHKTRNTSTN
TSTSTSNGNAGNADNADNGGAKATDTSCPAPVSSANMLELHQQQDHKPISLPKLPTMWIP
AVDSINCIRDELEIDTETGDDDGKDENVVYKSDAPIPRGCGVYYYEVEILSASKDSAVCM
GFCKTSAPLTKPPGFETESWGYHSDYGNVMCCQGTSKDYGPSFNQPGDVVGCCINFKKRE
AFFTKNGMPLTKAFSDLPSDPLYPAIGVKKKSTNSPGARIKANFGGSGPFVFDIKQYVLK
QKHETQKRIESSTKVPAHAARNAFQEKQLAQGNLNPLINNLVMSYLTHVGYVDTAEALYR
DVCRDQDMQDEGTGGGDVSMEPPSDEGLKSLASYLSPDITIRHQIRGLILSGDIDGAMAL
VEEHYPTVFESQDMVLFQLKCRKFVELLQANEVIEAVEYGRELKMEYANDPRPQVQDLLR
HAFSLIAYDSDQVNEELDTVKSREELWEQLSSAILVAHGRSPVAPLKRIVQHTRQMIKVL
GESGNDTASFLNVTRDFM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG