YALI0F10791g

Overview

Description weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1, 4-glucan glucosidase
Locus type CDS
Locus tag YALI0F10791g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 1442079..1444505
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2427 (nuc.)
Previous locus YALI0F10769g Next locus YALI0F10857g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F10791g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F10791gYALI0F10791g_mRNA-001YALI0F10791g_CDS-001

Nucleotide sequence

 

>YALI0F10791g
ATGCTTGTCTTCAACCTTATGCTGGCCGCTTTGGCAGCCACCAAGGAAGTTCCCAGTCCC
ATTGACTCCTTCTCACTGTTCCCCAAGAGCTCCCCTGACTCCGACACCGGGAGCGTCTCC
GATATCTAGGTTTTCAACTGTGGTTCCAGTACAGAATCACTGGAGACTCTCGTGGAGGCA
GGAGATCACTTCAAGTTCACCGTCGATGAGTCCCTCTACTTTGGAGGCAAGGAGCTGGCT
GCTGATGAGATTGACGACGCCAATAAGGTACTTTTCAAGGTTGTCAGTGACGGAAAGAAC
ACCTTCACCTGTACCTACACTGACCACGTGACCAACTTCGACTTCTTCAAGGGAGACTTC
TCCATCGAGTCCTACATCAACACCGATGGGTCCTTTACCAAGAAGGAGAGCCTGGACATC
TCAATCTTTGGTCACGATCTCTTTGACTTCAAGCTGTCCAAATCCGTCAAGCTCACCGAC
TTTGATCTCACAAAACCCTTCAAGATCGGAAAACGAATTGGCGACGAGATCGGATGGGCT
ATCCGATACCCCTACAGCCCTTACAACCGAATCGAGGGCAAAGACCACCTCCAAGGGCCA
GCTCTTCCCCAAGCTGCAGTACGTCTACGACGATTACACCCTCGGCTTCTTCGACAAGGC
TAACATTTTGAAGAAGCTGACCAACCTCGAGTCCAATCAATACACCAGCTTCACCGGCAA
GCTGCTCGAGAACATGTATAACATTGTCTTCAGCAAGATCCCCAAGGATATCGTTCTCTT
CTTCCAGTTCCGTGCCCAGATTATCTCCAAGGAAAGCAAGTACTGCAACTCCTTCCAGCT
CGAGATCTTCGACAAGCCTGGAAATTCAGGTGGCCGAAAGGGCGACAAGTCTACCCTGGA
AAGCTGTCTTGAGGGTGGAAGCAGCGATAGCGGTGCCCCCGGCGGAAAGGGTAAGTGGTG
GGAAAGTGGAAGCCCAAAACTTCCTCGTCTGCTGTAGTGGAGCCCGAGACTTCTTCTACC
GTGGTTGAGCCTGAGGGAGAAACCCCCCCTGCATACCAATTCCTCCAAGCATCACCCCCC
CTCGCCCTACTTACATTAAGAAGATCACCAAGGAGCGTCCTCCTCGCCCTACTTATATTA
AAAAGACCACCAAGGAGTGTCCTCCTCATCCTACTAATATTAAAAAGACCACCAAGGAGT
GTCCTCCTCATCCTACTCATCCTCACCACACTCGCACCAAGTCTTCTTCTGCTGAAGAGA
CTTCTGACATCGTCGAGACGTCTTCCACTGACCCTATTATCGAGGCCGAGGCTTCCACCA
CTTTGATTTCTGAGACGTCCATCCCTGTCGAGTCTTCCGGCGTCGTCGGGACTTCTTCTG
CTCCTGAGCCTACTATCGACGCCGAGGCTCCCACCACAACCGCCGTAGAGACTTCGTCTG
CTCCTGCCCCCGAGTCCTCTAGCGAGTCCCCAATTGTCCCCAGAACCTCTGTTGAGTCTG
CTGTTGTTCCCGAGTCCTCCCCTGTTCCCGGATCCTTTGTGACCGAGTCTATCCCTGCCG
AGACCTCCTTTATCCCCAAGGGGTCTGTCACCACCCTATCTGCCTCCGTGACTTCCGTGC
CCGACGAGACTACCAGGTTATGGCGAATGTGGCGAGGCCACCGTGACTGTTACCACTGTC
GTTCCCGAGCAGCACACCACTGCCACTGTCGTCACCGTCATCGAGGACAAGACAGTCACC
ATCACAGTTCCCTGCGAGACCACCTCTGCCATCGCCGAGCATACTTCTGAGCCTGTCCCT
GTGCCTGCCACTGTGAACGCTGACGAGACCACCACCACCTACGTCACTATCATCACCACC
CAGACCGTTGAAGAGAAGACCGTCACCTTGGTTGTTCCTTACGATACAGCCACCAAGGAG
ATTAAGCCAACTCCTGTCTCTACCCCCGAGAGTCCTGAGGTTCCCATCGCTACCTCCGAG
GGCCCCGGTCTTTCTCCTGAGGCACCTAGTCTTTCTCCTGAGGCACCTGGTCCTCCTGAG
TCTCCCGAAGCCCCTGTTCATGCTCCCGAGTCTCCCGAGGCTCCTGCTGCCACACTCGTG
TCTCACGAGTCTCCCGAGTCTCCCGAATCTCCAGATGCACCAGATGCCGCCTCTGAGACC
CCTTCCGACGCCTCCGAGACCCCTTCCGACGCCTCCGGGACCCCTTCCGACGCCTCCGAG
ACCACTGTCGACGCCTCCGAGACCCCCGTTGATACCCCCGAGGTTCCCGCTCCTGCCCCC
CAAGCTCCCGGCACTGTGCTGCCCATTTCCGTTGCTCCTTCCCGGATCCCCGACACCCCT
GTCAAGTCTGGACCTGAGCAGGCCAACGGCGCTTCTCGAGCCACTACCGGCTCTCTTCTT
CTTTCTCTGCTCGCCGTTCTGGCTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F10791g_CDS-001

Protein length: 809 aa.
Product: Conserved hypothetical protein

>YALI0F10791g_CDS-001 MLVFNLMLAALAATKEVPSPIDSFSLFPKSSPDSDTGSVSDI*VFNCGSSTESLETLVEA
GDHFKFTVDESLYFGGKELAADEIDDANKVLFKVVSDGKNTFTCTYTDHVTNFDFFKGDF
SIESYINTMGPLPRRRAWTSQSLVTISLTSSCPNPSSSPTLISQNPSRSENELATRSDGL
SDTPTALTTESRAKTTSKGQLFPKLQYVYDDYTLGFFDKANILKKLTNLESNQYTSFTGK
LLENMYNIVFSKIPKDIVLFFQFRAQIISKESKYCNSFQLEIFDKPGNSGGRKGDKSTLE
SCLEGGSSDSGAPGGKGKWWESGKPKTSSSAVVEPETSSTVVEPEGETPPAIPIPPSITP
PRPTYIKKITKERPPRPTYIKKTTKECPPHPTNIKKTTKECPPHPTHPHHTRTKSSSAEE
TSDIVETSSTDPIIEAEASTTLISETSIPVESSGVVGTSSAPEPTIDAEAPTTTAVETSS
APAPESSSESPIVPRTSVESAVVPESSPVPGSFVTESIPAETSFIPKGSVTTLSASVTSV
PDETTRLWRCGEATVTVTTVVPEQHTTATVVTVIEDKTVTITVPCETTSAIAEHTSEPVP
VPATVNADETTTTYVTIITTQTVEEKTVTLVVPYDTATKEIKPTPVSTPESPEVPIATSE
GPGLSPEAPSLSPEAPGPPESPEAPVHAPESPEAPAATLVSHESPESPESPDAPDAASET
PSDASETPSDASGTPSDASETTVDASETPVDTPEVPAPAPQAPGTVLPISVAPSRIPDTP
VKSGPEQANGASRATTGSLLLSLLAVLA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG