YALI0F10197g

Overview

Description similar to uniprot|Q9HGY3 Candida boidinii D-amino acid oxidase
Locus type CDS
Locus tag YALI0F10197g

Location

Species Yarrowia lipolytica Positions 1385920..1387961
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2042 (nuc.)
Previous locus YALI0F10175g Next locus YALI0F10219g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F10197g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F10197gYALI0F10197g_mRNA-001YALI0F10197g_CDS-001

Nucleotide sequence

 

>YALI0F10197g
ATGGTCCAAAAAGACGAAAAAATCGCCATTCTCGGGTGAGTATGGACACGTGACGGCCAC
ATGACGGCGGAGTGGGGAGTCGGATGGTGGCAGTCCGGTGGTGTTTGGGTGTTGGACGGC
GGATATCAATGTCAGGTGCTGTTGTGTACTTTGTTGTGTTCGTTGATTTTGATTTGATCC
GACTGGAAATTGCTAAGATTGAGGTCTTCTGACTGAAAGACTGTCCTGGTAGTCGGATGT
GTTGGCCAATGGTGATCCATGTCTCTGAATATCTGTATGACACGGTTTGGATGTGATCCG
GCCGACACTACACACTCTAGACCTCTTGGATGTCCTACCTTGATCTCTGATAGGAGTGCT
TTTTGAGAATCCACTGCTCGTCTGAATTGGTAGCTGGGGTACTTGCAAATCTGGGCCGTT
CACATTGTTTTCGAGCTTGTAAAGAGCCTGTGAATGGAGCCATACGCCATTCACCGGCAG
ACTAGACTCTATTCATGTTCTGTCGCACTCCCGAAACCCCCGACTACCAGGATCTGGTCT
GCAGTCTACCCTTCGGGTGTCATGTAATCAACTCCAGGCCTGTGGAACATGGATCGGCTT
TTAAACCTGGAGAGCTGCAATGAAGACTGTTCCGGCCCTTCCGCTAACCTAGCGCCGGTA
TCACCGGACTCTACATTGCCTACATTCTTACCGAAAAAGGCTACTCCAACATCCACATGA
CCGCCCAGTATCTTCCCGGAGACACGTCTATCGACTACACGTCTCCCTGGGCCGGTGGCA
ATTTCTGCGCCATTTCTGGCTCCGATCCCGCCACCCTGGTGTACGACAAAGAGACCTATC
TCGGCCTGGCTCCCATTTTCGACACCTGGGGTGCCGCCAAGGGGTTTGAGCGGCTCCCTA
TCACCGAATTCTGGGACTTTGAGCCCCCCAAACAGAAAATTGAGTCTCTCAAAACCTACC
TCAAGGACTTTCAAATTCTCCCCTCTTCCGAGCTTCCCGAGGGCGCCAAGTTTGGCGTGC
GGTACCTCACCTACAACTTCAACTGTCCGGTTGTTCTGGTAAGTTTCAAAAAGTACCTCG
AGTCCAAGGGCGTCACGTTTGAGCGAAAGACCGTGCAGAACCTCAGCGACGCGTTCGGAG
ACGCCAAGGTGCTGTTCAATGCAACTGGTCTGGGAGCTCGAACACTGGGCGAGGTCGAAG
ACAAACGGTGCTTCCCTACGCGGGGTCAGGTGGTTGTGGTGCGGGTCCCTTCTGTGAAGG
AGAACCGGGTGCGGTGGGGCACGGACTACGCGACCTACATTATTCCCCGGCCCGGCTCTG
GAGGTCACGTGGTGTGTGGAGGATTCCTGCAGAAGGATCGGTACACTGCGTCCACGTTTG
GCGAGGAGGCCGAGGATATTATTCGACGAACCACACAGCTTATGCCCGAGCTCAAGGGCG
CGGAGATTGTGCGGGACGCTGCTGGTCTGCGCCCTTCTCGAGAGGGTGGAGTTCGGATTG
AGCGGCAGGTGGATCTGCAGGGTCGGACCATTATCCACGACTATGGTGCTGGAGGAGCTG
GTTACCAGAGTGGCTATGGTATGGCCAAGCATGCCATTAGTTTGATGGAGTGGGACAGTA
AGTTGTAAGTATGATGAATGGATGGATGATGTATGTAGTAAGAGGTTGGAGTCTTCATGT
CGGCTCTGTTCGCTACTGTACTGGTCTGTACACCAGAGTTTACCTGGACTCGAGGCAAGT
CTCCACACTCAGGCCTTCCATCCAAACAGTCGGTAGGTCTCTAAGACCCGTGCTTGCGGC
CGTCCTAGTTCTGAGACAGCTCTCTGGAGACATTGAGCAAGATGGATATCAGCTAATACA
ATGATGGTGCCTAAATCAGTCGACACTTGGTTATGGGATTGATTAAGAGCCCAGACTCGG
ACCTGAAGAAAACATATTGAGCTTTCTAAAATACAGTCGAAACAACTGTAACATCACGTG
ATGTCGCTTTCACGTGCACGTGCAGCGTATACAATACAATATATTGACAAATTCAGCCCA
AT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F10197g_CDS-001

Protein length: 337 aa.
Product: D-amino acid oxidase, putative

>YALI0F10197g_CDS-001 MVQKDEKIAILGAGITGLYIAYILTEKGYSNIHMTAQYLPGDTSIDYTSPWAGGNFCAIS
GSDPATLVYDKETYLGLAPIFDTWGAAKGFERLPITEFWDFEPPKQKIESLKTYLKDFQI
LPSSELPEGAKFGVRYLTYNFNCPVVLVSFKKYLESKGVTFERKTVQNLSDAFGDAKVLF
NATGLGARTLGEVEDKRCFPTRGQVVVVRVPSVKENRVRWGTDYATYIIPRPGSGGHVVC
GGFLQKDRYTASTFGEEAEDIIRRTTQLMPELKGAEIVRDAAGLRPSREGGVRIERQVDL
QGRTIIHDYGAGGAGYQSGYGMAKHAISLMEWDSKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG