YALI0F10098g

Overview

Description similar to uniprot|P30822 Saccharomyces cerevisiae YGR218w CRM1 nuclear export factor, exportin
Locus type CDS
Locus tag YALI0F10098g

Location

Species Yarrowia lipolytica Positions 1361131..1364722
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3592 (nuc.)
Previous locus YALI0F10076g Next locus YALI0F10131g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F10098g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F10098gYALI0F10098g_mRNA-001YALI0F10098g_CDS-001

Nucleotide sequence

 

>YALI0F10098g
ATGGAGGGAATTCTAGTGTTTGAAGGCGACTTTGACGTTGCTCTGTTCGACAACGTGGTC
AAGGCCTTCTACCGAGGCACCAATGCCACCGAGCGAAAGCAGGCCGAGCAGGTGCTCAAC
CAGTTCAAGGCCCACAACGACGCCTGGCTCAAGGCCGATCAGATTTTAGAAAAGTCCACA
GAGTCCGAGTCCAAGTGTGAGTATGAGACGCACGGAGAAGGAGAGGAGAAGAAGAGGAGA
TGGAGAGCAGATGGCTCAATTGTGGTGATGCTGCACAGACCAGGTCATGAGTTAGCACCA
TTCGCCACTGCCGCAGTGGTTGTGGCGGCACAGAAGGTGATGTCGCTACCAGCGCCATCG
CTGCCAATGCAATCGCTGCCAGTGCAATCGCTGCCACGTCCTAGCCATTGCCCGCTTTGC
TTCACCTCGCGATCTAAATGATTCCCATACTAACCCAGATATCGCCCTGTCCATCCTCGA
CAACATGATCAAAACCCGATGGAAGCTGCTGCCCCAAGAACAGCGACTGGGCATTCGAAA
CTTCCTCGTGGCGCTCGCAGTCGGCCTCTCCAACGACGACGCCACCTTCAAGAGCCAGCG
GGCCCTCATCAAGAAGTACGACCTCACCATTGTGCAGATCCTTAAACAGGACTGGCCCCA
GGAGTGGCCCAACTTCATCGACGAGATTGTCGAATCGTCGCAAATGTCCGCCAACATCTG
CGAAAACAACATGCTCATCCTGCGATACCTGTCGGAGGAGGTCTTTGACTTCTCCCAGGA
AACCATGACCCAGGCCAAGACCAACACCCTCAAGTCCCAGATGGTCTCCGAGTTCTCCAA
AATCTTCGAGCTGTGTCTCAAGGTGCTGGAGAAGGCTGATCGACCTTCGCTGATCCAGGC
CACCCTGCACTCCCTGCTTCGATACCTCGGCTGGATCCCTCTGGATTTCATCTTCAAGAC
CCCCGTGCTGGAGCTGTTGGTCAACAAGTTTCTAGAGCCTGAGGAGTTCCGAGACTTGAC
TCTCAAGTGTCTCACCGAGATCTCGTCTCTGTCCACCAAGGACTACGACCAGCAGTACTT
CGCCATGATCACCGGCGCCCTCGGCATCATCAACCGGGTCATCCCCCTGCAGACGGACTT
CAAGGCCGTCTACGCCGAGGCCAGCACATCCGACCAGGAGTACATTCAGAACCTGGGTAT
CTTCCTCACCTCGTTTCTGACACACCACCTGGACCTTGTGGAGCGACAGGAGAGCCAGGA
CCTGCTCATCAACGCGCACATGTACCTCATCAAAATCTCCAAGATTGAGGAGCGAGAGCT
GTTCAAGGTGTGCCTGGACTACTGGGGACGTCTCGTCTCCCAGCTCTACGAGGAGATCCA
GAGTCTGCCTCTCAACGACCTCAACTCTGTGTTTGCTCAGAACCCCTTTGGCCAGAACCT
GAACGCCCAGGGTGCCATTGCCCCCGAGGTGCTGCAAAACTACAACCTTCGAAAGCACAT
GTATGGCCCCGTTCTGTCGCAGCTGCGTCTGGTGATGATTGAGAATATGGCCCGTCCCGA
AGAGGTGCTCATTGTGGAGAACGACGAGGGAGAAATCGTGCGAGAGTTCTTCCGAGAGTC
CGACACCATCATTCTGTACAAGAGCATGCGGGAGGTGCTGGTCTACTTGACCCACCTGGA
CGTGTCTGACACCGAGCGAATCATGTCCGACAAACTGGCCCGACAGCTGGACGGCTCTGA
GTGGTCTTGGAACAATCTCAACACCCTCTGTTGGGCCATTGGTTCCATTTCGGGTGCCAT
GAACGAGGAGCTGGAGAAGCGGTTCCTCGTGTCCGTGGTCAAGAAGCTGCTGTCGCTGAC
GGACCAGATGCGTGGCAAGGACAACAAGGCTGTGGTCGCCTCAGACATCATGTACATTGT
CGGCCAGTACCCCCGATTCCTCAAGGCGCACTGGAAGTTCCTCAAAACGGTCGTCAAGAA
GCTGTTTGAGTTCATGAAGGAGACCCACGAGGGTGTCCAGGATATGGCCTGTGACACCTT
TATCAAGATTGCGCAAAAGTGCAAGCGGCACTTTGTGGCCCAGCAGCCCAACGAGACAGA
GCCTTTCATCGATGAGATCGTTCGAGATCTGGGCGAGATCACCGAGGCGCTGCAGCCCTC
GCAGGTCCACACGTTCTACGAGGCCTGTGGCCATATCATTTCCGCCCAGAACGCCCGAGC
CATTCGAGAACGGCTGCTTTCTGAGCTCATGCGACTCCCCAATCAGGCCTGGGAGCAGCT
CATGAACCAGGCTCGAAACGACCCTGACATTCTGTCCAACCCTGAGCCCGTCAAGACTTT
CTCCAACGTGATGAAAACCAATGTGGCCACCTGCACCGCTCTCGGCGCCGGCTTCCAGCC
CCAGCTGAAGCTCATCTACATGGACATGCTGCACCTGTACCGGGCCGTGTCCAGCACCAT
TTCCGAGGCAGTGGCTTCGCAGGGCCAGATTGCTACCCGAACCCCCAAGGTTCGAGGTCT
GCGAACCATCAAGAAGGAGTCGCTGAAGCTGATCCAGACCTACGTCTCCACCGCCGACAA
CCTCGAGGATGTGTCGCAGAACCTGGCGCCTCCTCTCTTCCAGGCCGTCCTGGAGGACTA
CAGCTCCAACGTGCCTGACGCTCGAGACGCCGAGGTGCTCAACTGCATGAACACGGTCGT
GACCCGCGTGGGCGGCCAGATTCCCGACGGAGTTGTCATGATTCTGCAGAATGTGTTTGA
GTGCACTCTCAACATGATCAACACCAACTTCACCGACTACCCCGAGCACCGAGTTGGCTT
TTTTGAGCTGCTGCGAGCCATCAACCTGTACTCGTTTGCTGCCATTGTTACTCTTCCCGA
CGAGGGCTTTTCTCTCGTGGTGGACGCGTGTCTGTGGGCTTCCAAACACGATCACCGAGA
GGTGGAGTCTGCAGGTCTGGCTCTGACATACGAGCTGCTGCAAAACGTGTCCGAGAAGGC
CACACCTGAGTTTGCCGCAAAGTTCTACCAGAACTACTTTTTCAACATTCTGCAGGGTAT
GTTCCATGTGCTCACAGACACGGACCACAAGGCCGGCTTCAAGCAGCAGTGCCAGGTGCT
GGCCAAGCAGATTGATCTGGTCGAGTCCAACGCCATCTCGGTGCCTCTGTACCAGCCCGG
CCAGGTGCCCGATGGCACGTCCAACTCTGTCTATCTGCGGCAGTACATGGGCCACATGCT
GCTGGAGGCCTTCCCTCATCTGACCGAGGGCCAGGTGTCCAACTTCATTGAGGGTCTGTT
TGCATTACACAAGGACTTCCCCCGGTTCAAGCTCAATCTGCGAGACTTCCTGGTGCAGAT
CAAGGAGTATGGCGGAGGCAACACGGAGCATTTGTACGCCGAGGACAAGGAGCGGGATCG
GGTCGAGGCCGAGCGACAGAACAAGGAGAAGGCTCTCAAGATTGGCGGTTTGGTCAAGCC
CGCCGATATGGACGAGGATTTGTAGATCATGAGCGGAGCCAAAGATCCGAGCAAAATTGT
AAGTGAGACCATCCATATCATTCAGTAAATATATTGTTGAAAATATCTGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F10098g_CDS-001

Protein length: 1081 aa.
Product: Major karyopherin, putative

>YALI0F10098g_CDS-001 MEGILVFEGDFDVALFDNVVKAFYRGTNATERKQAEQVLNQFKAHNDAWLKADQILEKST
ESESKYIALSILDNMIKTRWKLLPQEQRLGIRNFLVALAVGLSNDDATFKSQRALIKKYD
LTIVQILKQDWPQEWPNFIDEIVESSQMSANICENNMLILRYLSEEVFDFSQETMTQAKT
NTLKSQMVSEFSKIFELCLKVLEKADRPSLIQATLHSLLRYLGWIPLDFIFKTPVLELLV
NKFLEPEEFRDLTLKCLTEISSLSTKDYDQQYFAMITGALGIINRVIPLQTDFKAVYAEA
STSDQEYIQNLGIFLTSFLTHHLDLVERQESQDLLINAHMYLIKISKIEERELFKVCLDY
WGRLVSQLYEEIQSLPLNDLNSVFAQNPFGQNLNAQGAIAPEVLQNYNLRKHMYGPVLSQ
LRLVMIENMARPEEVLIVENDEGEIVREFFRESDTIILYKSMREVLVYLTHLDVSDTERI
MSDKLARQLDGSEWSWNNLNTLCWAIGSISGAMNEELEKRFLVSVVKKLLSLTDQMRGKD
NKAVVASDIMYIVGQYPRFLKAHWKFLKTVVKKLFEFMKETHEGVQDMACDTFIKIAQKC
KRHFVAQQPNETEPFIDEIVRDLGEITEALQPSQVHTFYEACGHIISAQNARAIRERLLS
ELMRLPNQAWEQLMNQARNDPDILSNPEPVKTFSNVMKTNVATCTALGAGFQPQLKLIYM
DMLHLYRAVSSTISEAVASQGQIATRTPKVRGLRTIKKESLKLIQTYVSTADNLEDVSQN
LAPPLFQAVLEDYSSNVPDARDAEVLNCMNTVVTRVGGQIPDGVVMILQNVFECTLNMIN
TNFTDYPEHRVGFFELLRAINLYSFAAIVTLPDEGFSLVVDACLWASKHDHREVESAGLA
LTYELLQNVSEKATPEFAAKFYQNYFFNILQGMFHVLTDTDHKAGFKQQCQVLAKQIDLV
ESNAISVPLYQPGQVPDGTSNSVYLRQYMGHMLLEAFPHLTEGQVSNFIEGLFALHKDFP
RFKLNLRDFLVQIKEYGGGNTEHLYAEDKERDRVEAERQNKEKALKIGGLVKPADMDEDL
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG