YALI0F09746g

Overview

Description similar to uniprot|P24583 Saccharomyces cerevisiae YBL105c PKC1 ser/thr protein kinase
Locus type CDS
Locus tag YALI0F09746g

Location

Species Yarrowia lipolytica Positions 1330223..1334071
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3849 (nuc.)
Previous locus YALI0F09691g Next locus YALI0F09757r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09746g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09746gYALI0F09746g_mRNA-001YALI0F09746g_CDS-001

Nucleotide sequence

 

>YALI0F09746g
ATGTCTGCCCCCGACGACATCGAGTCGGCCATCCAGAAGCTGTACAAGCAGATTGAGGTG
GAGAAAAACATCATCCGCGGCACCAAGGCCGCCGCCCAGGCGTCCCAAGACTCGGCGTTC
AAACTGCAGTGCCAGTCCAAGCTCACGGACAACCAGAAGAATGTCAACTACCTGGAGAGC
AAGATGCGGGAGCTCAAGCTGAGAACCCGCCCCGAAGGTGAGTATCCGACGCAAACTGGC
AAAGACACGCTCTCCGTAGCACCCCCACTAACCCAGCCATGGCCCCCGGCCCACACCCCA
CACAAAAACGAGCAAACTTCACCAAGCTCGATCTCATCAAGTACGACACGCCCTTCTTCG
GCCCCCGGATCCAGCATATGCTGCAGCAACTGGAGTTCAAGATGAGCGTGGAGAAAAACT
ACAAGGAGGGCTTTGAGAACGCGCTACGGCTCTACCAGCGGGACCCCAAGAAGATCCAGG
AGATTGAAAACATGCGCAAGGAGTCGTTGCAGAAGATGGGCCTGCTAAAGAAGTCGCTCA
AGCGCTACCAGGACATGCACATTGATATTGACGACGCCATTGACAGCGACAGCATCAACG
CCCCCAACATTAGACGTCCTCTGTCGGGAATCGTCACCATCACCGTCCACGCCCTCCGAA
ACGTGGAACACATTGCGTCGGTGCGTGGCAAGCGGCCCGAAACCATGGTCACTGTTAAGT
GCGAGGACAAGCTGGTGGGCCGAACCAAGCTGTCCCGAACCGAGCGGTGGAACGATACCT
TCCAGTTCCCCGTGGACAAGGCCAACGAGGTCGAGATCATCATCTACGACCGAGACGGCG
ACCACTTCAAGCCCGTGGGTCTCCTGTGGCTCACAATCAGCGACGTGGCAGAGGAGATTC
GACGGCGAAAGAACGGCCAGAAGCTCGCTGCAACAGGTTGGGTCGCGGCCTCCGAAACAG
CTGCTGGCGGTCATGCCGACCCTGCTTCGCGGGGAGGTGCCGCTGCCTCTGGTGCCACCG
GTTCGGGTCTGCCTACCCTTGAGGCGCCCCAGATTGACCGGCCAGTATCTTCTGTGGTCA
ACTACGCAGGCCCCACCATCGAGGAGTGGTTTGTAGTGGAGCCCGCAGGCCAGATCTACC
TAACTCTGGGCTTCGAGAAAACCAATCGGGGCGTCAAGCGGCCCCACGAGCTGGGAGGAC
TGGGTCTGGGCCGTCAGAACGCCATTCGAAAGAAGGAGGACGTGCACGAGATCCACGGCC
ACAAGTTTGTGGCGCAGCAGTTCTACTCGATCATGCGGTGCGCCCTCTGTGGTGACTTTT
TGAGTGGAGCGGGTTTTCAGTGTCAGGATTGTCGGCTCACGTGCCACGGCAAGTGCTACT
CCAAGGTGGTCACCAAGTGCATCTCCAAGTCGTCCACCGAAACGGATCCCGACGAGGAGA
AGCTTAACCACCGAATTCCTCACCGTTTCCAGGTCTTCACCAATAAGTCTGCCAACTGGT
GCTGCCATTGCGGTTACATTTTGCCCCTGGGCCGTAAGTCTGTGCGCAAATGTGGCGAGT
GTGGAGTCACTGCACACGTGCAGTGTGAGCACCTTGTGCCCGACTTTTGCGGTATGTCCA
TGGAGCGGGCAAATCAGATTCTCAGTGAGATCAAGTCGACAAAGATCCGACGGGCGTCCC
AGCACCCCACTACGTCGACCTCGTCGTCCCAGCAGTCGACGCTGTACAGTGCCACTCCGT
CGCACATGCATGTCAATGCAGGAGACAGAGATGGGAATGGCTATGGCGCCGGCAACAGCT
CCGATCGTCTGTCATTGACCCCCGTCGATACTAACAGTAGCATTAATAGTACTGCGACCA
TGCGGGGCGAGCGAAAGAACACGGTGCGGCGCAAGGAGGTGGGTTCTGCTCCCTCTCTGC
CTCCCAAGGAAGGCTCTGTGTCGTCGAGTGCAGCCTCTCTCGTTGGCATTCCTCCTCCTG
GAGTGCCTGCCCCTGGCCCTCCTTCTGCTGTCCCCGATCGAGGACAGGCGTACCACCAGC
AACGGTACGACCCCACAGCATCGACTCTGGACCCAAGGGCCCGTCGAGAGTCGCAGGGTT
ATGTGCTACCGACTTCTGCTTCGCCCAAGTCGCCTTCTCGGTCACCTCAGCAGCAGCAGT
TTCAGTCGTCTCCCTCGCGCGACAGAGAGGAGCAGCCCCTGTATCCGCCTCGAAACTCTT
CTGTGGGCGATATCTACCCCAACAGAGAATCCACACCCAGCCCGTCGCAGGTGCTGTCTC
CTGTTGAGGACGATGTGAAGATGGAGGATGAGGACGCGTTTGACAAGAGTATCATCAACA
ACGAGCCTGAAGCCTCAGACGCCTCCGTCAGCTACTCGCCTCCCAAGAGCATGATCATTG
ACGAGCAGCACAAGAAGCACAGTGCATCAGGCTCCCTTGACTCAGGCTACCAGTCGCTGC
CTGTGCCTGGCGTGCATGCTGAGCAGCAGCAGCGGGACGAGGAAGATGCGCGAGCTCGAG
AGCAGCAGCACAAGGAGCAGCAGGCGCTCCGAGCACAGCAACAGCGTGAACAGCAGATGC
GTGAACAGCAGTACCAACAGCAACAGTATCAGCAGCAACAGTACCAGCAGCAACAGGCGC
AGCAACAGCAGGTGCAGCAACGACAGGCCGCCCAGCAGGCACAGCAAGCCCAGGCTGCGG
CTGCTGCCGCTGTTGCTGCCACTGCGTCCCAGACCCAGGCAGCCGGCGCTTCCCCGGCTT
CTCCCGCTCCTGCTAGCAACCGACATTCCGTTGTGGGCAAGAAGAAGCGGCCGCGAATCG
GGCTGGACGATTTCAACTTCCTGGCGGTGCTCGGAAAGGGTAACTTTGGAAAGGTCATGT
TGGCGGAGTCCAAGAAGACGACCAACCTGTACGCCATCAAGGTGCTCAAGAAGGACTTTA
TCATTGAGAACGACGAGGTGGAGAGCACAAGATCCGAGCGACGGGTGTTCCAGATCGCCA
ACCGAGAGTCGCACCCGTTCCTGCTCAATCTGTACTCATGTTTCCAGACGGAAAACCGAG
TCTACTTTGTCATGGACTACGTGTCGGGAGGAGATCTCATGTGGCACATTCAGAAGGAGG
GTGTGTTCAAGCCCGGCCGGGCCCAGTTCTACGCCGCAGAAGTGCTGCTTGGAATCAAGC
ACTTCCACGACAATGGAGTCATTTACCGAGATCTCAAGCTTGACAACATTCTGCTCACCC
GAGACGGACATGTCAAGATTGCCGATTACGGTCTCTGTAAGGAAGACATGGACTATGGCC
GAACCACAGGTACCTTCTGCGGTACTCCTGAGTTTATGGCTCCGGAGATTCTGCTGGAGC
AGCGATATGGCCTCGCTGTCGACTGGTGGGCCTTTGGCGTGCTCATCTACCAGATGGTAC
TCGGACAGAGTCCCTTCCGAGGAGAAGACGAGGACGAAATCTTCGACGCCATTCTGGCCG
ATGAGCCCCGATACCCCATCACTCTGCCCGGTAATTGTGTGTCTATTCTGACGCAGCTGC
TGACGCGAGAGCCCGAACGACGTCTGGGATCGGGTCCTCGAGACGCTGAGGAGATTATGG
CGCACCCGTACTTTGCCAACGTCAACTTTGATGATATTTATCACAAGCGAATCCCCCCGC
CGTTTGTGCCCAAGATCACGTCGCCCACAGACGTGACTAACTTTGACCAGGAGTTCACTT
CCGAGACCCCGGCTCTGACTCCCGTCACCACCACCCTGACCTCCGCCATGCAGGATCAAT
TCAGAAACTTCACTTGGATGTGTGATGAAGCTATTTGAAATAGGTTAACATGATTTATGA
TGTTTTATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F09746g_CDS-001

Protein length: 1253 aa.
Product: Protein serine/threonine kinase, putative

>YALI0F09746g_CDS-001 MSAPDDIESAIQKLYKQIEVEKNIIRGTKAAAQASQDSAFKLQCQSKLTDNQKNVNYLES
KMRELKLRTRPEAMAPGPHPTQKRANFTKLDLIKYDTPFFGPRIQHMLQQLEFKMSVEKN
YKEGFENALRLYQRDPKKIQEIENMRKESLQKMGLLKKSLKRYQDMHIDIDDAIDSDSIN
APNIRRPLSGIVTITVHALRNVEHIASVRGKRPETMVTVKCEDKLVGRTKLSRTERWNDT
FQFPVDKANEVEIIIYDRDGDHFKPVGLLWLTISDVAEEIRRRKNGQKLAATGWVAASET
AAGGHADPASRGGAAASGATGSGLPTLEAPQIDRPVSSVVNYAGPTIEEWFVVEPAGQIY
LTLGFEKTNRGVKRPHELGGLGLGRQNAIRKKEDVHEIHGHKFVAQQFYSIMRCALCGDF
LSGAGFQCQDCRLTCHGKCYSKVVTKCISKSSTETDPDEEKLNHRIPHRFQVFTNKSANW
CCHCGYILPLGRKSVRKCGECGVTAHVQCEHLVPDFCGMSMERANQILSEIKSTKIRRAS
QHPTTSTSSSQQSTLYSATPSHMHVNAGDRDGNGYGAGNSSDRLSLTPVDTNSSINSTAT
MRGERKNTVRRKEVGSAPSLPPKEGSVSSSAASLVGIPPPGVPAPGPPSAVPDRGQAYHQ
QRYDPTASTLDPRARRESQGYVLPTSASPKSPSRSPQQQQFQSSPSRDREEQPLYPPRNS
SVGDIYPNRESTPSPSQVLSPVEDDVKMEDEDAFDKSIINNEPEASDASVSYSPPKSMII
DEQHKKHSASGSLDSGYQSLPVPGVHAEQQQRDEEDARAREQQHKEQQALRAQQQREQQM
REQQYQQQQYQQQQYQQQQAQQQQVQQRQAAQQAQQAQAAAAAAVAATASQTQAAGASPA
SPAPASNRHSVVGKKKRPRIGLDDFNFLAVLGKGNFGKVMLAESKKTTNLYAIKVLKKDF
IIENDEVESTRSERRVFQIANRESHPFLLNLYSCFQTENRVYFVMDYVSGGDLMWHIQKE
GVFKPGRAQFYAAEVLLGIKHFHDNGVIYRDLKLDNILLTRDGHVKIADYGLCKEDMDYG
RTTGTFCGTPEFMAPEILLEQRYGLAVDWWAFGVLIYQMVLGQSPFRGEDEDEIFDAILA
DEPRYPITLPGNCVSILTQLLTREPERRLGSGPRDAEEIMAHPYFANVNFDDIYHKRIPP
PFVPKITSPTDVTNFDQEFTSETPALTPVTTTLTSAMQDQFRNFTWMCDEAI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG