YALI0F09493g

Overview

Description weakly similar to uniprot|P19736 Saccharomyces cerevisiae YDL030w PRP9 pre-mRNA splicing factor
Locus type CDS
Locus tag YALI0F09493g

Location

Species Yarrowia lipolytica Positions 1305358..1307041
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1684 (nuc.)
Previous locus YALI0F09471g Next locus YALI0F09515g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09493g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09493gYALI0F09493g_mRNA-001YALI0F09493g_CDS-001

Nucleotide sequence

 

>YALI0F09493g
ATGACAACCAGAGCTGCTCTGGAGGAAATGGAGGTGATCGAGGCCGGTATTGCCGAGCGA
CTGGCCTTCAACCCGCTCATTCTGCCTCCTTCACAGGCCCTGACCCCCAACTCACCTCTC
CAACCGAGACTACAGAAGCTGAAAAATGTGCCCTTCACACGACAAGTAGGCACCCCCACA
ACCCACAGGCAGACAGTGCTGCGCCAGCACGAGATTGCCACGATGCTGGATACGTACCAG
AAGCTGGCTCGACGGCTCAAGGCCGAACTCGACGCCCCCAGAGGCAAATCTGGGTCTCGA
AATCTGTCTTCCAAGGAACTCAAAGGCGTCATGACGGACTTTTACGCCAAAATCGACAAG
ATCAAACAGACACTGGTGCCCGGAGAACAAGCTCAAGATATGTACGCCAACTACACTCTC
AAACGACCGGCTCTAGACGTGTTTGAAGACGACGGAGAACAGGAGGAGAGCGTTATGAGC
CAGGCTGAGAGCAACACGCTTCCCTCAGGCATTTTCAACACAGCTCGAAAGATCAATTTT
GGCCAGAAATACACAGACGCCGAAAACTCGGGCAGATACCTCGACATGACCCCTCTATAC
ATTGAATACCAGCAGCAGAGAATGGGTCATGTGGGATACATTGGATTCATCAAATCCTTT
TACAACGTCGACATTTATGACCCCCAGACGTGTGCGGCTCTGGGCAAAAAGTACCCTGTG
TTCCTCGAGTCCATCGTCTCGTATTTGGAGTCGTTTATCACCAAGAAGCACATTCTGGAG
GACCCTCAGAAGACGATTGACTCGATTCGAAAGTCAATAAAAGTGACTGATTCCAAGCAG
GACAAGGAGGAGAACCCTGAGTTGTTCTGTAAGTTCTGTGACAAACAGTTCACCAACCAG
GCTGTCTACGACAACCATTTGCCTGGAAAGAAGCATAAGAAGGCCGTTGCCCGAGCTGAG
AGTGGTGAAACCCCTACACCTACATCTGCTCCCAAGGCTTCTACTGCAGCCGCTCGGACT
CCTGAGACGATTTTGGCCCATCTGGAAGAACTGGCTGAATTCCTGAAGTCGACTATTGAC
AGCACCGTTGCCAATTTGGAACGGAAGCAAGCGCTGACTAATTCCGAGAGACAGGCTGAA
ATCGCGGCTCAGCAGGACCAGGACCGTCTTACTGACGAAAACCTCAGATACGGACAGCAG
AGCGATGGCTCCCCCTGGTCCAAGAAACAAAAGACTGGAGATGAAGATGACGAAGACGAA
GATGAGGTCATCTCCAACCCTCTCAAGCTGCCTCTTGGGTGGGACGGAAAACCCATTCCT
TTCTGGCTGTATAAGTTGCATGGTTTGGGAATTGAGTACACATGTGAGATCTGTGGAAAT
ACCACCTACCGGGGCCGAAAGATCTTTGACAAGCACTTTTCCACACCCAGACACATCTTT
GGACTCCGATGTCTTGGTATCGAGCCGTCTCAGGCATTTAAAGGCATCACCAAGATTGAG
GAGGCCAATGCATTGTGGGACCGAATGAAGAAACAGCTCAAGACGGTGGAGACTCGAGAA
GAAAACATTGTCGAGGTGGAGGATAGCGATGGAAACGCCATGAGTGAGAAGACCTACGAG
GATCTCAAGCGTCAGGGATTGTTGTAGATAACTTATAGCATAATGTATATTACCTAATAG
CGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F09493g_CDS-001

Protein length: 549 aa.
Product: Conserved hypothetical protein

>YALI0F09493g_CDS-001 MTTRAALEEMEVIEAGIAERLAFNPLILPPSQALTPNSPLQPRLQKLKNVPFTRQVGTPT
THRQTVLRQHEIATMLDTYQKLARRLKAELDAPRGKSGSRNLSSKELKGVMTDFYAKIDK
IKQTLVPGEQAQDMYANYTLKRPALDVFEDDGEQEESVMSQAESNTLPSGIFNTARKINF
GQKYTDAENSGRYLDMTPLYIEYQQQRMGHVGYIGFIKSFYNVDIYDPQTCAALGKKYPV
FLESIVSYLESFITKKHILEDPQKTIDSIRKSIKVTDSKQDKEENPELFCKFCDKQFTNQ
AVYDNHLPGKKHKKAVARAESGETPTPTSAPKASTAAARTPETILAHLEELAEFLKSTID
STVANLERKQALTNSERQAEIAAQQDQDRLTDENLRYGQQSDGSPWSKKQKTGDEDDEDE
DEVISNPLKLPLGWDGKPIPFWLYKLHGLGIEYTCEICGNTTYRGRKIFDKHFSTPRHIF
GLRCLGIEPSQAFKGITKIEEANALWDRMKKQLKTVETREENIVEVEDSDGNAMSEKTYE
DLKRQGLL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG