YALI0F09383g

Overview

Description similar to uniprot|P20436 Saccharomyces cerevisiae YOR224C RPB8 RNA polymerase subunit ABC14.5, common to RNA polymerases I, II, and III
Locus type CDS
Locus tag YALI0F09383g

Location

Species Yarrowia lipolytica Positions 1299972..1301067
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1096 (nuc.)
Previous locus YALI0F09361g Next locus YALI0F09405g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09383g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09383gYALI0F09383g_mRNA-001YALI0F09383g_CDS-001

Nucleotide sequence

 

>YALI0F09383g
ATGTCTACTTTATTCGAGGATTCCTTCAAAACCACGTCTGTGGACTCCGCCCGATACGAC
CGGGTCTCACGAATAACCGCCCAGAGCCTGAATCATGACGACATCCATCTGACTCTGGAT
GTCAATACAGAGCTGTTCCCCATGTCCAAGGGCGACGTGGTGACCGTGGCTCTGGCCTCC
CAGCTGACCGACAAGGAGACCACCTATTCTGGCTGGAGAGAACCCAAGGTGGGCGAAAAG
AGTCTGGCTGACGACTACGACTACGTCATGTACGGAACCGTCTACAAGTTTGAGGAGGGC
AGTGGAGAGAAGGTGTGAGTATGGAAGAGCGGAGGAGCAAGAACGACGTCCATCGACATG
CCTCAGGCGTGTCATTGGAGTCATTGGATTCCCACATTGGGTCGTAGATGTAGTAGTTTG
GATGGGTCAATCAATGATGAATGCTGAACATGTTCATCAAGAGAGAAGGACTTGATTCGA
AGCAGCAACAACAACAGTGGCTGGATACGGGTGGCAACAAAGCGACAACTCGACTGGACA
TGTGGCTTCTGTGAGATCGAAATAGCCGATTCGATGCCAATTCTTCGATTAAATTCGCTG
ATTTGGCGATGAATTAGCTCTTCGAGCAATCTACAGGCGACGCTATGATACCTCAAAGAG
AATGCTTATTCCTCGACGATAATGTTAAAGCTCGACGAGAAGAGGTGATGGATTTCGAAA
TCTGTTTGATACGCAATCTCCAAAGTCTCACAGGTGCTTCCTAAACACTGTCCGACGTTG
CTGTGGGCAAATCTAGCACCGACGACAACGTTTCTAGGTCTCTATGAAGTAATCATTTGA
AACACAAAGCCGTTCGTCGATACTCATTAACACCATCTCCACTACAAACACTACTATGAC
CCGCGACAATCACTCATTTCTACGTACTAACCCCAGCGCTGTTTACGTCTCGTTCGGAGG
ACTCTTGCTCTGTCTTGAGGGAGGATACAGACATCTCTCGTCGCTCAAGCAGGAAAATGT
CTACCTGCTGATGAGAGCGTAACCCATTACTTACGTAATTGTAAATTATAATATATAGAG
CGTTATGCAGGGCGTA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F09383g_CDS-001

Protein length: 140 aa.
Product: RNA polymerase subunit ABC14.5, putative

>YALI0F09383g_CDS-001 MSTLFEDSFKTTSVDSARYDRVSRITAQSLNHDDIHLTLDVNTELFPMSKGDVVTVALAS
QLTDKETTYSGWREPKVGEKSLADDYDYVMYGTVYKFEEGSGEKVAVYVSFGGLLLCLEG
GYRHLSSLKQENVYLLMRA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG