YALI0F08635g

Overview

Description weakly similar to uniprot|P32349 Saccharomyces cerevisiae YPR190c RPC82 DNA-directed RNA polymerase III, 82 KD subunit
Locus type CDS
Locus tag YALI0F08635g

Location

Species Yarrowia lipolytica Positions 1203218..1205258
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2041 (nuc.)
Previous locus YALI0F08613g Next locus YALI0F08657g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F08635g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F08635gYALI0F08635g_mRNA-001YALI0F08635g_CDS-001

Nucleotide sequence

 

>YALI0F08635g
ATGAGCGAGCTGCACAACCCGGACCAGTCTTCGCGGGCTCTGTTCGATCTGTGCCGCGTG
CTTCTCAAGGGCATATACGGCGAGCTATCGGCGGTTCTGGTGGGGTCTCTTCTGGACTAT
GGGCGTCAGACGGCTGCTGAGCTCGCCAAAACCACCAAACTGCCGCTGTCAGCGGTGCAC
AGTGGTCTGGCGGCGCTGGTGCAGAACCGCTTTGTGCTGTACTGGGCCAACGACCGCAAA
TCCGGGCGAGATACAGACGACATTGGCGAGTCCAGCTCCATCCATTACGTGGCCAACTGG
AAGGAGATTTACCAGGTGGTGCGGGCTGGCGGCATGGTGGATGCGGTGCGAAAGGACTTC
GGCAAGGGCCCCGGCGGCAAAAGCAACCCCGAGTCGGGCGAGAGGTGTGCCGAGATTGCC
CAGAACCTGCTCGTGTACGGACACATGCGGGTGGCCGACTACCTGGAAGCCACCCCCGAG
CACGACCGAGACAGCGTGGAGGCCAGTATCGCGGTGATGCTGCGCAAACGGTTTCTGGTG
CCCGTACAGGCGTGGCAGTTCAAGCCCGAGACAGATCTCTACGCACGCATGTTCAGAGAC
CACCTCAGTAAACTGCCTCTGTCCATGGCCGAGTCTGCCCGAAAGAACCAGGCTGCGGTA
AGCGCCAAAACGGAGCTCGAGCGCATGCAGGAGGAGCGCAACTCGCTGAATCTGGGATTT
GTGTCGGGCTCTGTGGCCCGAACTAAGGGCGTCCCTGTCCTGAACCGCGCCGAGAAGCTC
GACCACCAGGCCGTGCTGTGTGCCAATCCCGACAAGTTTCTGGTGATTGCGCGAAACGAG
GAGCTGGCCAAGCTGGCCGAGGAGCGATGTGGCAAGACGGCGGCCGAGGTCTACAGACAG
TGTCTCAGCAAGTACGTTGGCCGTCTGCATTCTTGCACTCAAGACACTTCTCCAGGCGCT
GAATTCAACATCACGTCGATGGAGATTGCCAAGACAATCGATCCTCGCCTGGACGGTCTT
AGACCGCGAGGAAAGGGATCACGATCCGTTTCTCCCCGGCCGCAGAGCAAACGAGTCAAG
ACTGAAGAGGGATATACAAAGACTGGAGACTATGACGAGAAGGAGGTGGACGTTGAAGAA
GATATGGAAGAGGAGTTGTCGGGCGTTGCTTTAGCAACAGCAGTATCCAAACAAATGCAG
ATTTTGGCAGCCTCACCGCTCAAGTTTGTGCAGAGCGTGGGCACCAAGGGCGGAGGAGAG
TGGTACGTCAACTTCAAAGAGGCTACCGAGTGCCTGCGGGGCGCGCGATACGAGCAGATC
ATTCAGTGGAAGTACGGCCGCGTGGCCAAGCGGTTGCTGCGAGCTGTCAAGGACAAGGGC
AAGGTGGACGAAAAGCTGCTGACCAATATTGCGCTGTTGCCCGTTAAGGAGATTCTCAAC
CACCTGCACGACTTGCATTCTGTCGGCGCTCTGGACGTGCAAGAGCTGCCTCGAACCGCC
GACAGAGCTGCGTCTCGAACCATTTTTCTGTGGCATCATAGAGCCAACCGGGCATACTCG
CTCATTTCACAGGACATTTACAAGTCTTTGTCGCGCTGTTTCGAGCGGGTGGCTGCCGAG
CGTGCCAAGCTGCCCATTCTGCTGAGCAAGCTGCAGCGAGAGGATGTCAAGGGACACGAA
GATGAATTTCTGACCGAGCAGGAAAAGGCGGATCTCAAGGGACTGAGAATGAGAGAGGAG
AAGCTGCTGGTGCAGATGAACAGGTTGGATGGTTTGATTCGGGTATTTAGAGATTACTAG
ACGACGAGCGAAGCCAGTCGTCTGAGCAGCTCAAAAGACTCACTTGATCGGAGTGAACGC
CTGACCGGAGTGTCTGAACGCTTGGTCGGAATGGTTGGATAGGACTCACTTGATCGGAGT
GGTTGGAGGAGACTCGCTTGAATGAGGCTCTCACCAGTGATAGGAAGAGACTCACTTTGA
GCAAAGCGACTGAATGAGAATACTCACCCATGTAAAGAAATACTAATTGCATAGAGAAGG
A

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F08635g_CDS-001

Protein length: 600 aa.
Product: Conserved hypothetical protein

>YALI0F08635g_CDS-001 MSELHNPDQSSRALFDLCRVLLKGIYGELSAVLVGSLLDYGRQTAAELAKTTKLPLSAVH
SGLAALVQNRFVLYWANDRKSGRDTDDIGESSSIHYVANWKEIYQVVRAGGMVDAVRKDF
GKGPGGKSNPESGERCAEIAQNLLVYGHMRVADYLEATPEHDRDSVEASIAVMLRKRFLV
PVQAWQFKPETDLYARMFRDHLSKLPLSMAESARKNQAAVSAKTELERMQEERNSLNLGF
VSGSVARTKGVPVLNRAEKLDHQAVLCANPDKFLVIARNEELAKLAEERCGKTAAEVYRQ
CLSKYVGRLHSCTQDTSPGAEFNITSMEIAKTIDPRLDGLRPRGKGSRSVSPRPQSKRVK
TEEGYTKTGDYDEKEVDVEEDMEEELSGVALATAVSKQMQILAASPLKFVQSVGTKGGGE
WYVNFKEATECLRGARYEQIIQWKYGRVAKRLLRAVKDKGKVDEKLLTNIALLPVKEILN
HLHDLHSVGALDVQELPRTADRAASRTIFLWHHRANRAYSLISQDIYKSLSRCFERVAAE
RAKLPILLSKLQREDVKGHEDEFLTEQEKADLKGLRMREEKLLVQMNRLDGLIRVFRDY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG