YALI0F08569g

Overview

Description similar to uniprot|P26783 Saccharomyces cerevisiae YJR123w RPS5 ribosomal protein S5
Locus type CDS
Locus tag YALI0F08569g

Location

Species Yarrowia lipolytica Positions 1192889..1193681
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 793 (nuc.)
Previous locus YALI0F08525g Next locus YALI0F08591g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F08569g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F08569gYALI0F08569g_mRNA-001YALI0F08569g_CDS-001

Nucleotide sequence

 

>YALI0F08569g
ATGGCCGACGAAACCGCCCCTGTTGCTCTTGCCCTCCAGCTCCCCAAGGACATCATCGCC
GAGTCCGGCTCCGTCAAGCTCTTCAACAAGTGGACCTACGACGACGTTGAGGTCAAGGAC
ATTTCTCTCACCGACTATGTCCAGATCTCCCAGCCCGTTTACATCCCCCACACCGCCGGC
CGATACGCCAACAAGCGTTTCCGAAAGGCCCAGTGCCCCATTGTCGAGCGACTCACCAAC
GCTCTGATGATGAACGGCCGAAACAACGGTAAGAAGCTCAAGGCTGTCCGAATCGTCGAG
CACGCTCTGGAGATCATCCACCTGCTCACCGACCTCAACCCCCTGCAGGTTGTTGTTGAC
GCCATCATCAACTGCGGTCCCCGAGAGGACTCCACCCGAATCGGTTCCTCCGGTGCCGTT
CGACGACAGGCCGTCGATGTCTCTCCTCTGCGACGAGTCAACCAGGCCATCTCTCTGCTC
ACCATCGGTGCCCGAGAGGCCGCTTTCCGAAACATCAAGACCATTGCTGAGTGTCTTGCT
GAGGAGCTCATCAACGCCGGAAAGGGTTCTTCCAACTCTTACGCTATCAAGAAGAAGGAC
GAGCTTGAGCGAGTCGCCAAGTCTAACCGATAAGGTGATGTAAAAAATGTATTAAGTATT
TGCACGGACCAGGCATCAGTGGCGAACTTCAGGTGTGAACCACCGACCGAGCCCCGAGTC
TATTAGTAGATCTGCACCTATTGCTCGCGTATGAACAGTTGAGCAAGATCACCACTCCAA
TATTCATGTTTCA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F08569g_CDS-001

Protein length: 211 aa.
Product: Ribosomal 40S subunit protein S5, putative

>YALI0F08569g_CDS-001 MADETAPVALALQLPKDIIAESGSVKLFNKWTYDDVEVKDISLTDYVQISQPVYIPHTAG
RYANKRFRKAQCPIVERLTNALMMNGRNNGKKLKAVRIVEHALEIIHLLTDLNPLQVVVD
AIINCGPREDSTRIGSSGAVRRQAVDVSPLRRVNQAISLLTIGAREAAFRNIKTIAECLA
EELINAGKGSSNSYAIKKKDELERVAKSNR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG