YALI0F08459g

Overview

Description highly similar to uniprot|P38203 Saccharomyces cerevisiae YBL026w SNP3 Sm-like
Locus type CDS
Locus tag YALI0F08459g

Location

Species Yarrowia lipolytica Positions 1187025..1187411
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 387 (nuc.)
Previous locus YALI0F08437g Next locus YALI0F08481g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F08459g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F08459gYALI0F08459g_mRNA-001YALI0F08459g_CDS-001

Nucleotide sequence

 

>YALI0F08459g
ATGCTGTTTTTTTCGCTATTCAAAACGCTGGTCAATCATGAGATTACCGTAGAGGTGAGT
ACGCAAAGGGGACGGAGTGCGCGCGCCAGCCAGACCGCTAACACAGCTCAAAAACGACCT
GCAGATCCGAGGCATTCTCAAGTCGGTGGACCAGTTCATGAACATCAAGCTGGAAAACGT
GACCACCGTGGAGGAGGACAAATTCCCGCATCTGACGGCGGTGCGAGACCTGTTCATTCG
AGGCTCGGTCGTGCGATACGTGCATCTGCCGCCCGGAGCCGTGGACACCACCTTGCTGGA
GGACGCCACTCGACGGGAGGCTCTGTCCCACTCGGGTAAGGCTATCAAATAAGTTATTAT
ACTATATTACACTTGCTTGCATTGTTT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F08459g_CDS-001

Protein length: 100 aa.
Product: Component of the cytoplasmic Lsm1p complex involved in mRNA decay, putative

>YALI0F08459g_CDS-001 MLFFSLFKTLVNHEITVELKNDLQIRGILKSVDQFMNIKLENVTTVEEDKFPHLTAVRDL
FIRGSVVRYVHLPPGAVDTTLLEDATRREALSHSGKAIK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG