YALI0F08415g

Overview

Description similar to uniprot|Q04792 Saccharomyces cerevisiae YMR250w
Locus type CDS
Locus tag YALI0F08415g

Location

Species Yarrowia lipolytica Positions 1182607..1184373
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1767 (nuc.)
Previous locus YALI0F08393g Next locus YALI0F08437g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F08415g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F08415gYALI0F08415g_mRNA-001YALI0F08415g_CDS-001

Nucleotide sequence

 

>YALI0F08415g
ATGGTCCTCTCCGAACACGTCAACGCCGACAAGCTGCTGTCCAACCTCACCGGCAAGGGT
GACGAGCACGCCATCCGGGCTCTCATTGCCTCCCACACCCTGCGAGACCCCTACTCATCC
AAGTACAACTCGCAGGAGCCCATTCCCAAGTTCCGAATTCCCGAGGAGGGCTGCGAGGAG
AAGCAGGCCTACCAGCTTATTAAGGATGACCTGGATCTCGACGGAAAGCCCAACCTCAAC
CTGGCTTCTTTCGTCAACACCTACATCTCCGACCGAGCCGAGAAGCTGGCCGTGGAGAAC
CTGACCAAGAACCTGGCCGATGCCGACGAGTACCCCGCTCTGATGACCGTTCACGCCCGA
TGTGTCTCCATTCTCGGCCATCTCTGGAACAACACCGACCACGAGAAAGCTATCGGTACT
GCCACCACCGGATCTTCCGAGGCCATCCATCTTGGAGGTCTGGCCATGAAGAAGCGATGG
CAGGAGAAGCGACGGGCCGCCGGCAAGTCCACTGAGAAGCCTAACATTCTCATGGCTGCC
AACGCCCAGGTCGCCCTCGAGAAGTTTGCCCGATACTTTGATGTCGAGGACCGAATCATC
CCCGTGCGAGAGGCCTCCAAGCACTGCCTCGATCTGTCCAAGATCAAGGAGAACCTCGAT
GAGAACACCATTGGTATCTTCGTCATCATGGGATCCACCTACACTGGCCACTACGAAGAC
GTCCAGGGCGTCGCCAAGATTTTGGATGAGTACGAGAAGGAGACCGGTCACTCCATTGAC
ATCCACGTTGACGGAGCCTCCGGAGCCATGGTTGCCCCTTTCCTCTACCCCGATCTCGAG
TGGGACTTCCGAGTGCCCCGAGTCAAGTCCATCAACACCTCTGGCCACAAGTTTGGTCTC
ACAACCGCTGGTCTTGGTTGGATTCTCTGGAGAGACGCAAAGTACCTGCCCAAGGAGCTC
ATCTTCGAGCTGCACTACCTGGGAGGTAAGGAGGAGTCCTACACCCTCAACTTCTCGAGA
CCCGGTTTCCCCGTGCTGCACCAGTACTACAACTTCCTGCACCTGGGATTCGACGGCTAC
AAGCAGCTGCATGCCTCTTCCATGGCTAACGCCCGACTGCTATCTGTCTTCCTCGAGGCT
ACTGGACACTACACTTGCGTCTCCGAGATCCACCTGCCTGCTAATGGCTCCAAGCCCAAG
GATGTCAAGCACGTGGCTACTGCCGATCCTCTGCAGTACATGGCTGGTCTGCCCGTTGTT
GCCTTCCGATTCTCCGACTCGTTCCGAAAGGCACATCCTGAGGTCCCCCAGGCTGCTGTC
TCCACCCTGCTACGAGTCAAGGGATACATTATCCCCAACTACGAGCTGCCTCCTTCCGAG
CAGAAGACTGAGATTCTTCGAGTGGTTGTGCGACAGTCCATGTCCATCGACCTGCTCGAC
CGACTCATGGAGGACATTTCCGCCATCACCAATGTGCTGCTCGAGGCCGTGGAGGATGTG
AAGAAGCTGCGGGCCGAGGGTGACCACGATCCTCAGCTCATTCACAAGTACGTTCTGACT
CTGGTGACCGGAAAGCCTGTTGAGGAGCGAGAGGAGGACTGGGAGGGACACTCCACTTTC
CGAGCTGCCTGTTAATTACAGTTGCTAGCGGCAGGATGAAGTGTTTGAAGTTGCAGAGCC
TTCAGGGAGCTTTCTTGTAAGTAGGGCTCTATGGACCTGATTAGATAGATAAATTTATGA
TTAACGTATGATCAGTTCAGCAAACGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F08415g_CDS-001

Protein length: 545 aa.
Product: Glutamate decarboxylase, putative

>YALI0F08415g_CDS-001 MVLSEHVNADKLLSNLTGKGDEHAIRALIASHTLRDPYSSKYNSQEPIPKFRIPEEGCEE
KQAYQLIKDDLDLDGKPNLNLASFVNTYISDRAEKLAVENLTKNLADADEYPALMTVHAR
CVSILGHLWNNTDHEKAIGTATTGSSEAIHLGGLAMKKRWQEKRRAAGKSTEKPNILMAA
NAQVALEKFARYFDVEDRIIPVREASKHCLDLSKIKENLDENTIGIFVIMGSTYTGHYED
VQGVAKILDEYEKETGHSIDIHVDGASGAMVAPFLYPDLEWDFRVPRVKSINTSGHKFGL
TTAGLGWILWRDAKYLPKELIFELHYLGGKEESYTLNFSRPGFPVLHQYYNFLHLGFDGY
KQLHASSMANARLLSVFLEATGHYTCVSEIHLPANGSKPKDVKHVATADPLQYMAGLPVV
AFRFSDSFRKAHPEVPQAAVSTLLRVKGYIIPNYELPPSEQKTEILRVVVRQSMSIDLLD
RLMEDISAITNVLLEAVEDVKKLRAEGDHDPQLIHKYVLTLVTGKPVEEREEDWEGHSTF
RAAC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG