YALI0F08305g

Overview

Description similar to uniprot|P29295 Saccharomyces cerevisiae YPL204w HRR25 casein kinase I
Locus type CDS
Locus tag YALI0F08305g

Location

Species Yarrowia lipolytica Positions 1164071..1166154
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2084 (nuc.)
Previous locus YALI0F08283g Next locus YALI0F08327g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F08305g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F08305gYALI0F08305g_mRNA-001YALI0F08305g_CDS-001

Nucleotide sequence

 

>YALI0F08305g
ATGTCTTCTAGCAACTCGGTTCCGTCGCTTCTACAGTGAGTATTGTCTGCCGCGACAGGG
CAGCTGTCGTGATGCGGTATGAGATGAGGAGGGTGATGAATGACAAAAGGAGATGGATGG
TGATGGGTGACAAGGGTGGCAGTTGATGTGATGATGATGGTGATGGTGATGACATGCTGA
CGATGACATGCTACGCTGTTGAGGTGTCAGTCTCTCGCCGCTGCTATCGTCGTGGCTGTC
CACACCCACCATCTCATGACACTTGACTTATGTGACTGCATCATGTGCGATGTGATATTA
TAGATGTCACCGGCAACGAATGGTCTGGCGTTGCACTTTCCTCCGCGGAGCAGCCGTGGA
ACCACCCGATGCATCCCCCCCACGCTTTGCTGCTGCATCAAATTGCTCGCACTATTGCTC
GCACGATCGCCCATCCCACACATCAACTAATCACACACATACTAACCCAGCGACGTGAGA
ATTGCAAACAAATTCCAGATCCGGCGAAAAATCGGAAGCGGATCGTTCGGCGACATTTAC
TTGGGCGTCAACATCATTTCAGGCGAAGAGGTGGCCATCAAGCTGGAAAACATCTTCTCT
AAACACCCACAATTAGAGTACGAGGCGCGGGTGTACAAGACTCTGGCCGGCGGCACCGGC
ATCCCCTTCATCCGATGGTTTGGCTCACAGAATGAGTACAATGCGTTGGTGATGGATCTG
CTGGGCCCCTCGCTCGAGGACCTGTTCAACTTTTGCGAGCGACGATTCTCGTACAAGACG
GTGGTTCTTCTCGCCGACCAGCTCATCACCCGACTCGAATATCTGCATGCCAAGTCGTTC
ATCCACCGAGACGTCAAGCCCGATAACTTCCTCATGGGCATCGGCCGCCGAGGCAACCAG
GTCAACATTATAGATTTTGGCCTGGCTAAGCGATTCCGAGACCCCCGAACCCATTTGCAT
ATTCCCTACCGTGAGAACAAGAACCTGACGGGCACGGCGCGTTATGCCAGCATCAACACG
CATCTGGGCGTGGAGCAGTCGCGTCGAGATGACCTCGAGTCGTTGGCATACGTGCTCATC
TACTTTATGCGTGGCCAGCTCCCGTGGCAGGGTCTCAAGGCAGTAACCAAGAAGCAGAAG
TACGACCGGATCATGGAGAAGAAGATGACCACCAGCACAGACACGCTCACCAAGGGCCTG
CCCAACGAGTTTGCCATTTTCTTGTCATACTCGCGATCGTTGCGATTCGAGGACCGACCA
GACTACATTTATCTGCGTCGCCTCATGAAGGACTTCTTCATCCGATCCAACTACCGATAC
GACTACGTGTTCGACTGGACCGTGTTCCGATACAGAAAGGTCATCAACAGCATGGGAGGC
CGAGAGGGAGCCCAGCAGTCGCAGCTCACAGCCGGCCAGGGTCAGGACGAGGACCCCAAC
AAGCAGCAGCAGCAGCAGCGGGACTCCGCTTCTCCTGCCGCCGCCGGTGCTTCTCAGGGA
GCCTCCAACTCGCAGGTGAGTCTGCAACCTCAGCAGGCTCCCCGAGCCGGTGGCGAGGCT
CTGGCAGCAGGTGCCCAGGGCCAGGGTGTGCCTCCCCAGCAGGGCATGCGAGCCAAGACT
CCATCCCAGCGGCCAGATCTCAAGACCCGAATTGGAGACTGGGACATTCCTCCCCCTTTG
CGACTTTTTGACATTGAGAACCAGCAGCTCGATTACTACGACGACAAGAAGGCAGATACC
GATCAGTCCGACTGGCGAACACGGCTACGACGGGAGCAGCAGCGCATCCAGGGTAGCCCT
ACCAGCCAGGGTAACAGCGGCGCTGCCGGCTCAGGCACCGCTCCCGGTGGGCCTCAGCAG
GGCGTTCCCCAGCAACAACAGCAGCAGCCACAGCAACCGCTGGGACAGTTTGGACAGCCC
GGTGCATCGGCTCCTCCTGGACAAGGTCACGACGACTATGGCGCTACTCCCTGGATCTAG
CGGAGTTGGCATGAGTGTGTGACTGAACCAAAATCTAGTAAGTAATAATGTGTCATGAGT
TAGAAGGTGACGGCTATGTAATTAAGTGATTATATTTAGCGAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F08305g_CDS-001

Protein length: 515 aa.
Product: Protein kinase, putative

>YALI0F08305g_CDS-001 MSSSNSVPSLLHDVRIANKFQIRRKIGSGSFGDIYLGVNIISGEEVAIKLENIFSKHPQL
EYEARVYKTLAGGTGIPFIRWFGSQNEYNALVMDLLGPSLEDLFNFCERRFSYKTVVLLA
DQLITRLEYLHAKSFIHRDVKPDNFLMGIGRRGNQVNIIDFGLAKRFRDPRTHLHIPYRE
NKNLTGTARYASINTHLGVEQSRRDDLESLAYVLIYFMRGQLPWQGLKAVTKKQKYDRIM
EKKMTTSTDTLTKGLPNEFAIFLSYSRSLRFEDRPDYIYLRRLMKDFFIRSNYRYDYVFD
WTVFRYRKVINSMGGREGAQQSQLTAGQGQDEDPNKQQQQQRDSASPAAAGASQGASNSQ
VSLQPQQAPRAGGEALAAGAQGQGVPPQQGMRAKTPSQRPDLKTRIGDWDIPPPLRLFDI
ENQQLDYYDDKKADTDQSDWRTRLRREQQRIQGSPTSQGNSGAAGSGTAPGGPQQGVPQQ
QQQQPQQPLGQFGQPGASAPPGQGHDDYGATPWI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG