YALI0F08165g

Overview

Description some similarities with uniprot|P41892 Schizosaccharomyces pombe 7 CDC7 OR SPBC21.06C gene Cell division control protein
Locus type CDS
Locus tag YALI0F08165g

Location

Species Yarrowia lipolytica Positions 1151703..1155777
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 4075 (nuc.)
Previous locus YALI0F08157r Next locus YALI0F08173r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F08165g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F08165gYALI0F08165g_mRNA-001YALI0F08165g_CDS-001

Nucleotide sequence

 

>YALI0F08165g
ATGGTCAGCGCTACGCCAGCCCAGAAGGTCAATGGCAAGGAGCCGATGAATAATTATGTG
AGTGCGAATCGAGTTGTTTGGAGCCAAGCAGCTGGTGGCAAAAGTCGACTGAGCAGGATA
AGTTGACTTGGTAAGGTCAGATGTTCAGGGCATGAGAGAACATGCGAGAGGTTCAGCAAC
ATAGGGGGTGTGCCAGGTATGGCAGGATGATATGGCAACGGTGGAGGGATAAGTCGGATG
TGGGGGTCATACGAATCAACTACTGGTTTCATTTGTGTGCTATTTTGTTCAATTTGTCGT
TCTATTATGAAAAGACATCCACAACTTTCCACCGGTTTATGATCGTACGCAGCCCCTTGT
CACTGCTGTTGACACAAATGCCAGCTTTGAAACTCATTCCTAGTACTATCTCTATACAGC
AACTGGCTTCATTGTGGTGGTTGTTTCAACTGTGGTTAGGCTGAATGGTAGCTCCATGTT
CCTTCTGCTCCATATCCCCGTACTGATGCGTACGCCGACACGCACTCCTCTCTTTCGCTG
ACCCTTCCTTCACCATTACCAACACACATCAATGCACATGTGCTGTATGGCCTAGTACTC
GTCTGTTCGTTCGTGCTAACACAGACCCTCGGAGACTGCCTCGGCAAAGGCGCCTATGCG
TCCGTCTACCGTGCTCTCAACTGGAACACCGGCGAAGCTGTCGCCGTCAAACGGATCAAG
CTCTCGGACGTGCCTAAAAAAGGTGACGTCGACACCATCATGATGGAAATTGACCTGCTC
AAAAACCTCAACCATCCAAACATCGTCAAGTATCACGGCTTTGTCAAGACCCAGGATACC
CTCAACATCATCTTAGAGTACTGCGAAAACGGCTCATTACACTCCATCTGCCGCAAGTTT
GGCAAGTTCCCCGAAAACCTCGTGGCTGTCTACATGTACCAGGTGCTCAAGGGTCTGGCA
TACTTGCACGAGCAGGGAGTGATTCATAGAGATATCAAGGGTGCCAATATTTTGACCACT
AAAGATGGAAACTCGAAGCTGGCTGATTTTGGAGTCGCAACAACAACCATACTCGCTACC
GGATCTGTGGAAAACGGAGTGGCAGGTACACCCAACTGGATGGCCCCTGAGATCATTGAG
CTCAATGGTGCTACCACAGCCTCGGATATCTGGTCTGTGGGATGTACTGTGATTGAGCTG
CTCACAGGCAAACCCCCCTACCACAACCTAGGCCAAATGCCAGCCATGTTTGCTATTGTC
AACGACGATCATCCTGCATTTCCAGAAGGAGCGTCTCCTGCAGCTCTCGACTTTCTCGGA
CAGTGTTTCCAAAAAGACCCCAATCTGCGAGTGACGGCCAAAAAGCTGCTGCGACATCCG
TGGTTAGCTGAAGCGAGGACCGATAGCGAACGCAAACACGTCAGTGGGCCTCCCAAGCGA
TATGATGAGGTTGTAAAATCCGTGGAGCAGTTCAATCAAGCAGTCGAAGAGACTCCACGA
ACACCCCATCGTACTCAGGACGACATTTACGCTTCAATTCGCAAGTTTTCGCGCCAAAAA
CAGAACGAGATCACGTCCTCGGGCCATATCGAGAGTTGGGACGACGAGTTTGTGGGCGAG
CTAAACCCCCGATCTCCACATATCATAATTACCAAGCGAGAAATCACTCCTCCAGGTTCT
TCAACTTCTTCCAAACCAATTCCCTCCATCACCAGTGCCTTGAACAAGGCTTCTAGAGGC
AGTGTCTCCAATAAACTGCCGAGCATCAGCAAAGCCACGCGCCTAGATCCAAAGACCCCT
GTGCATTCAAGAATTCCGATTGAGAACTCGCCTTTTCGGGACGTGGAGGATGACGATGCG
TTTGCGGACGGCTTCAATGTGGCCGATATTTCCACAGACGACCTGAAAAAGAGGTTTAAC
AGCAGACAAAAGCCTACTGCCGCAGAGGACAAGTCTACAGATTACGCCACGATCAAGCTG
AAGCAGTTCTGTGAGGAGGGAGAGGATGAAGATGACTATACCAGTATGCTTGGAGATATG
GTAGATTTGACAGTAGGTGCTACTCCCAAGTCACAAAATGCGTACCCGGCGTCGTTTTCG
TCTTCGGACAAATCCCATCATTCGGACGACGAAGATCCATTTGCTGCTCTTGAGAATGAA
ACGAGATTCTCTCCAGAAGACATTGAACAGAACATTGCACGTGATAAGCTTGCTACGGCG
ATGCGCACGGCTGAGCAGCATGTTGGAAGACTCAACAGGGTGCAACTGACGACTTCCGAA
GTCCAGGATATTGTCCCTTCTCTTATTGACCTGTTGCAGCAGCATCCTGAGACAAAGAAG
ACAGTGGTCAAGTGTCACATAGTACTGCCTTTGCTGGAGCTTCTGGAGCGGTTTCAGACC
AACGAGGCGGTTGTTTGCGGTGTCCTATGCATTTTGGTGCTTCTTATTGATGATGATGAA
GCTGTTCTTGAGAGCTTGTGTTTCTCAGGAGGTATCCCAATCGTCACAATGTTTTCTACC
ACTCGATACCAGTCTGAAACTCGTATTCAGAGTGTAGCCATTGTTGATAGACTCTGCAGA
GGCTCCAAACTGGCTCTCCAGATGTTTGTTTCTTGTGGAGGTCTCAACATGCTGTCGCAG
TTGATTGAGGAGGACTTTGGTTTGCATCGTGAGTTTGTATTTGTGGGAATCTACGGCGTG
GCCAAGGTGTTCGAGGTGCAGGGGAGCGGTATGCGAAACGACTTTTGTCGAATCCTTTCC
CGTTCTTTCATTCTCGACTCTCTGGTGGCTATTCTGAGACAGCTGGTAGACGACTATGAA
CCCGATGAGTACCCCACAGACACCTCTGGATACTCGGACACGGACTACATCAACAAGATT
ATGAGCATTCTGACCATATTCTCGCAGACAGAGCCTCATGTCAAAGAGACTATTGCTTCT
CGAGCTGTGTTCAAGGGGCTCTTCAAGTGCTACAAACGTCTACCGACACATCACCGAGTC
ACCATGCTCAAGTTCATCAAGAGTGTTAGTGCCGTTCACACCGCCCTTGAGACCATGCAA
AACTCCAACGTCATTGAGTACCTTGTGGACTGTCTCAAGGACTGCACCAATATGGCCAAC
CAGCATTCCCGAGACCTGTCAATCCAGATCTACCACACTCTCTTCAATCTGTGTCGATTA
TCCCCTCACAGACAAGACGAGGCTGCCGAGTGTGGGGCTGCCCCATATCTTCAGGCAGCA
GCTCTTTCTTCTTTGCCCGTCAAGGACTTTGCTCTTCCTCTTTTGTGTGACATGGCTCAC
TCTTCCAAGGCAACTCGCAAGATTCTGTGGCGCCACGATGTGCTCACAACATATCTGCGT
CTACTTCCGGACCCTTACTACCAGGTCAACGCCATGGATTCTATCATTGTGTGGTTCGAC
GATGAAACAGCTCGTGTGGAGGAACGTCTAATTCGAAACACCTCTCTCGACCTCATCACT
CACTCCTTCTCGAACAACTCCAGATCCACGGCCTTTGAGCAGTACATGGACCTGTTCCAC
AAGTTGTTGCGGCTGAGTCAGCGTGTCGCTGTGGCTCTCACTGGGCCTATTCTGATCGGT
TTCCTGTCGTCCAAGCTGGAATCCAGCAAGCCTAGAATCCGGCTGACAGTGCTCAAGATC
ATCAGAACCCTCGTTGAAGCTAACGGAGACGATTACAGCTTCCTGGAGAAGCACGATTTG
GCCAAGCAAATCGCTTACCTTGCAGCAAACGAGAAGTCTGTTCTCGCTAGAGGTCTAGCC
AAGGAAATGGCTGAGGGCAAGAAGACGAAGTCACGAGATACAATTACAGACATGCCTGCT
CCACCAGTCAAGAGATACGATCCTATTCCCACTCCGAGCAAGAGAGTGGCTTCGGATTAT
AGACCGGCGGTGAAGCATCAGGTGGGAAACAGTAGCTCGTTTCTCTAGGAAAGCTTTCGA
GGACATTGTCCACGAAGAGGGACGCCACCATCTCATTTACAATACGATACCATACCAAAC
AATACACAAGACTCTGTCTTATTTATCATATAACATTAATGCATTGACAACATAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F08165g_CDS-001

Protein length: 1127 aa.
Product: Conserved hypothetical protein

>YALI0F08165g_CDS-001 MVSATPAQKVNGKEPMNNYTLGDCLGKGAYASVYRALNWNTGEAVAVKRIKLSDVPKKGD
VDTIMMEIDLLKNLNHPNIVKYHGFVKTQDTLNIILEYCENGSLHSICRKFGKFPENLVA
VYMYQVLKGLAYLHEQGVIHRDIKGANILTTKDGNSKLADFGVATTTILATGSVENGVAG
TPNWMAPEIIELNGATTASDIWSVGCTVIELLTGKPPYHNLGQMPAMFAIVNDDHPAFPE
GASPAALDFLGQCFQKDPNLRVTAKKLLRHPWLAEARTDSERKHVSGPPKRYDEVVKSVE
QFNQAVEETPRTPHRTQDDIYASIRKFSRQKQNEITSSGHIESWDDEFVGELNPRSPHII
ITKREITPPGSSTSSKPIPSITSALNKASRGSVSNKLPSISKATRLDPKTPVHSRIPIEN
SPFRDVEDDDAFADGFNVADISTDDLKKRFNSRQKPTAAEDKSTDYATIKLKQFCEEGED
EDDYTSMLGDMVDLTVGATPKSQNAYPASFSSSDKSHHSDDEDPFAALENETRFSPEDIE
QNIARDKLATAMRTAEQHVGRLNRVQLTTSEVQDIVPSLIDLLQQHPETKKTVVKCHIVL
PLLELLERFQTNEAVVCGVLCILVLLIDDDEAVLESLCFSGGIPIVTMFSTTRYQSETRI
QSVAIVDRLCRGSKLALQMFVSCGGLNMLSQLIEEDFGLHREFVFVGIYGVAKVFEVQGS
GMRNDFCRILSRSFILDSLVAILRQLVDDYEPDEYPTDTSGYSDTDYINKIMSILTIFSQ
TEPHVKETIASRAVFKGLFKCYKRLPTHHRVTMLKFIKSVSAVHTALETMQNSNVIEYLV
DCLKDCTNMANQHSRDLSIQIYHTLFNLCRLSPHRQDEAAECGAAPYLQAAALSSLPVKD
FALPLLCDMAHSSKATRKILWRHDVLTTYLRLLPDPYYQVNAMDSIIVWFDDETARVEER
LIRNTSLDLITHSFSNNSRSTAFEQYMDLFHKLLRLSQRVAVALTGPILIGFLSSKLESS
KPRIRLTVLKIIRTLVEANGDDYSFLEKHDLAKQIAYLAANEKSVLARGLAKEMAEGKKT
KSRDTITDMPAPPVKRYDPIPTPSKRVASDYRPAVKHQVGNSSSFL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG