YALI0F08063g

Overview

Description similar to uniprot|O43081 Schizosaccharomyces pombe MSF membrane transporter
Locus type CDS
Locus tag YALI0F08063g

Location

Species Yarrowia lipolytica Positions 1137712..1139556
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1845 (nuc.)
Previous locus YALI0F08041g Next locus YALI0F08085g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F08063g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F08063gYALI0F08063g_mRNA-001YALI0F08063g_CDS-001

Nucleotide sequence

 

>YALI0F08063g
ATGACCAGCCACACGAGCAGCCCCGACATTCTCCCCACTACCTCCGACTCATGGGACAAG
CCGCAATACCTGCCGCTGGAAAACCCGGAGCTGTACCTGATTGATTACAACGGCCCGGAC
GATCCCGAGTGTCCGCTCAACTGGCCCATGCGACGCAAAATCCAGACGACGGTGCTCTAT
GCCATCATGACCTTTGCAGCCCAGATGAACTCGGCTATTTTTTCGCCAGCGGCTCCCCAT
CTCATCAATGCCATGGGGGTGGGCCATGAAGTAGCCACCCTCACAACATCTCTCTATGTG
GCAGGAATTGCATTTGGACCTTTGCTGTTTGCACCCTTCTCCGAGGTCTATGGCCGCAAA
ATAGGAGTCACCATGCCCTTTCTCATCTCTATTCTCTTCACTTGTGGAACGGGAGGCAGT
GAAAACATCCAGAGTATCATTCTCACCCGGTTTTTCGCGGGATTTTTCGCCTCAGCACCC
ATTGTTTCCTCCGGAGGCGTCCTGTCCGATATCTGGGCACCTTCAGTCCGAGGAAACTAC
ATGGTGTTATATGGAGGCTTTGTGATTGCAGGAGCGTCTCTAGCGCCCCCGATCGGAGCT
CTGCTTCTCAAACACTCCCCCACGGCCTGGAAATGGGTCTGCTGGTTCATGGTAGCTCTC
AGCAGTCTTATTCTGGTGCTGGTGTTGATTCTCTGTCCGGAAACGTACCCTCCAGTGCTA
CTACAGCGAAAGGCCCGAAAGATCCGTCTCGAATCAGGAAACTGGGCTTACCACGCAAAC
CATGACCGATGGCAGTTCACACTTGACGAATTCATCAAGCGGCATCTGATCCGGCCATTT
GCTATGCTATTGACACCCATTTGTTTCTTCATTGCGCTTTATGCGTCCTTCGTATACGGC
ATCTTCTATCTTACGCTGACTTCCGTCAACTATCAATTTACCCAATACAGACACTGGGGC
TACGTCGAGGCCTTTTTGCCTACAATTGCCGTTTTTGCCGGCGCAATCGTCTTTGGGTCA
GCCTCCAATCTGTGGAGTGGAAAGCGCTATCGTCGACTGGTGCTGGCCAATGATGGAAAG
GCCATCCCCGAAGAACGGCTCGTAGTGATGATGATTTTCGGCTGGATTTTCTCTGCAGGA
CTCTTCATCACTGCCTGGACGTCGTCGCCAGACAATCACTGGGCCCTTCCATGCTTAGGC
CTGCTTCTAACAGGCTGGGGCTTCTTCGTCATCTTCCAGGCGTGTCTCAACTACCTGGTG
GACGCCTTCCAAAGATATGCTGCGTCGGCAGTGGCTGCCAACACCTTTGCCCGCTCCGTG
TTTGGAGCTGTCTTTCCCCTCTTTGCAAAGCAGCTGTTTGACACCTTGGGTGTAGATTGG
GGACTCTCGCTGCTGGCATTTGTGGCTGTGGCCATGATTCCCATTCCGTGGGTATTTTAC
CGCTACGGCAATCGCCTACGAGGCAAGAATCCGTTTCTCAGCGTTGTTTCGTGAACAGTA
CCAAGAGAGACTAACGGTTCCCGGGGGGGGGGGGGGGGGGGGGGGGGCTGAAGTGTTTTG
CAGGCACGCAAGCTGTCAAACGACAGACGCGTGAGCACCGCAGACTGTTAGATTGTCATA
TCGGCATTCGGATGCAAAAAGGAAAAAGCTAAAGGGAAAAAACCGGGACAGAGTTGCACA
GGGAATCAGGGGAGCAAAAGAAAGTTGCAAGAGAGAGCGAGAGAGAGGTAAGGAAGAGAG
GGAAACAAACAATAGACGGAGAACTGCGGGGTATAGGCCTGAACCGGGTTTTGGAACCAT
GCTAACCACTTACATCAGTAATTAATATCAGTCCACTTTGCATGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F08063g_CDS-001

Protein length: 498 aa.
Product: MSF membrane transporter, putative

>YALI0F08063g_CDS-001 MTSHTSSPDILPTTSDSWDKPQYLPLENPELYLIDYNGPDDPECPLNWPMRRKIQTTVLY
AIMTFAAQMNSAIFSPAAPHLINAMGVGHEVATLTTSLYVAGIAFGPLLFAPFSEVYGRK
IGVTMPFLISILFTCGTGGSENIQSIILTRFFAGFFASAPIVSSGGVLSDIWAPSVRGNY
MVLYGGFVIAGASLAPPIGALLLKHSPTAWKWVCWFMVALSSLILVLVLILCPETYPPVL
LQRKARKIRLESGNWAYHANHDRWQFTLDEFIKRHLIRPFAMLLTPICFFIALYASFVYG
IFYLTLTSVNYQFTQYRHWGYVEAFLPTIAVFAGAIVFGSASNLWSGKRYRRLVLANDGK
AIPEERLVVMMIFGWIFSAGLFITAWTSSPDNHWALPCLGLLLTGWGFFVIFQACLNYLV
DAFQRYAASAVAANTFARSVFGAVFPLFAKQLFDTLGVDWGLSLLAFVAVAMIPIPWVFY
RYGNRLRGKNPFLSVVS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG