YALI0F07018g

Overview

Description some similarities with uniprot|P50276 Saccharomyces cerevisiae YGR055w MUP1 high affinity methionine permease
Locus type CDS
Locus tag YALI0F07018g

Location

Species Yarrowia lipolytica Positions 1025264..1027135
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1872 (nuc.)
Previous locus YALI0F06996r Next locus YALI0F07029r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07018g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07018gYALI0F07018g_mRNA-001YALI0F07018g_CDS-001

Nucleotide sequence

 

>YALI0F07018g
ATGCCCTCTCAACGGTGGACTCAAATCAACCAGGGGCCAGATCGCGACTCATTGGAGCTC
GCGTCGTTGGCCTCGTCACACTCGGACGGTAACGAGGTCCATTCACCTTCCTCCTCACGC
AACCTGTCCCCCTGGGACTCGCCCATTGGTTCTGATTTTGGAGACGACAGAGAGCCGCTA
CATGAGCGTACAGAGAGTGGTCACACGGTGGAGTCATTCCAGCTGCAGCAGAGCACGGAT
GTCGGCCCGCAACAGGCTCTGGACAAGCAGAAATCGCTCACGTATTTCAACTGTCTGGCG
CTGGTGATGGGTTTGCAAGTCGGATCGGGCATCTTCTCGTCGCCAGGAACAGTTGATCAC
AATGCCGGGTCAATTGGCTCGGCGATCATCGTTTGGGCGGTCGCCGGAGTGCTCGCCTGG
ACTGGAGCCTGCTCATACACCGAACTGGGCTCCACTATCCCTCTGAACGGTTCGTCGCAG
GCGTACCTCAACTACGTTTTTGGGTCTCTAGCCGGTTTTCTGTTTGCGTGGGCAGCTCTT
ATGGTGCTCAAGCCGGGAAGTGCAGCCATCATTGCTCTCGTGTTTGGTGAATACGTGGTC
AAAATGTGTATTGGCACAGACACGCCTGCTCCCTTTTGGGCTGTCACTCTGGCAGCTCTG
GGCGGACTGGCATTTGTGACCGGCCTCAACTGCTTCAGCACCAAGAGCAGCACCCGGGCT
GGAAACGGCTTTCTGGTTCTCAAACTGGGTCTTCTGCTGCTCATTTTCATTGTCGGAATC
GTAGGAGTGGCCAAAAAAGAGACCCGGAGTGCCCAAATCAGCGAAAACTGGTTCAACGGT
GCATCCACGAAACTCGGCAACTACGCCGTTGCTCTGATTGCCGGAGTCTGGGCCTACGAC
GGATGGGACAATGTCAACTACGTGACGTCGGAAATGAAGAACTTTCGAAGAGACCTGCCA
CGTGTCATCCACACGGCGATGCCAGTGGTCATCTTCTGCTACCTGCTGGTCAACCTGGCC
TACTTCATGGTGCTGGACAAGGAAGAGGTGCGGTCCACCCAAACGGTGGCTGTGCTGCTG
GCAGGACGGGTGATGGGACGTGCAGGAGAAATCATCGTCTCCTTGTTGATTGCGCTATCG
TGTCTTGGCGCGCTCAATGCCACAACCTTTACTGCTGGCCGGTTGGCGTATGCATCTGCT
CAGGAGGGACACTTACCTAAACTGTTTTCCCGATTAAGCGCCCGAAACACCCCCATCTAC
TGCATTTTGATGGAGTGTACCTTGGCGGCTGTCTTCATCTTTTTTGGCGGCTTTGAGTCG
CTGGTCATGTTCTACGGAGTGTCTTCGTATCTCTTCTACTTTGTGACCGTGGCTTCCGTC
TTGGTGTTGCGGTTCAGAGAACCCGAGCTTGATAGACCGTATAAGACATTTCTCACCACG
CCAATCATTTTCTGCTCGGTTGCACTGTTTCTTATTTCCTACGGCTTCTTTGAGAAGCCC
AGACAAGCTCTCTTGTCGCTTTTGTTTATTGGTTCAGGAATTCCCGTTTACTTTTTGCGT
CATTATGGATACATGGGCGTGAGCGAGCCGAGAGCATGAACATGAGCGTGAGCGAGCCAA
GAGCACGGGCAAGAGCATGGGCATACGTTCATATTCCAGCGAGCGTAGCGAACATTAATT
AGTTAAACGGCTAGGAACTTCGCAGCTCAGGTCGTACAACACACAACAGCCACTTACGGA
GCAAAACACTCTCTATTGACTCTCTCTGTTCCATTAGAAGAACGTGGGTGGGACAATCGC
CACCTTTCTGCCAACTACAATGCCCTACAATGCCCCTTCTGCATATAACAATCCTAACCT
GTCCTAATCTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07018g_CDS-001

Protein length: 533 aa.
Product: Conserved hypothetical protein

>YALI0F07018g_CDS-001 MPSQRWTQINQGPDRDSLELASLASSHSDGNEVHSPSSSRNLSPWDSPIGSDFGDDREPL
HERTESGHTVESFQLQQSTDVGPQQALDKQKSLTYFNCLALVMGLQVGSGIFSSPGTVDH
NAGSIGSAIIVWAVAGVLAWTGACSYTELGSTIPLNGSSQAYLNYVFGSLAGFLFAWAAL
MVLKPGSAAIIALVFGEYVVKMCIGTDTPAPFWAVTLAALGGLAFVTGLNCFSTKSSTRA
GNGFLVLKLGLLLLIFIVGIVGVAKKETRSAQISENWFNGASTKLGNYAVALIAGVWAYD
GWDNVNYVTSEMKNFRRDLPRVIHTAMPVVIFCYLLVNLAYFMVLDKEEVRSTQTVAVLL
AGRVMGRAGEIIVSLLIALSCLGALNATTFTAGRLAYASAQEGHLPKLFSRLSARNTPIY
CILMECTLAAVFIFFGGFESLVMFYGVSSYLFYFVTVASVLVLRFREPELDRPYKTFLTT
PIIFCSVALFLISYGFFEKPRQALLSLLFIGSGIPVYFLRHYGYMGVSEPRA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG