YALI0F06600g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F06600g

Location

Species Yarrowia lipolytica Positions 977209..978703
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1495 (nuc.)
Previous locus YALI0F06578g Next locus YALI0F06622g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06600g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06600gYALI0F06600g_mRNA-001YALI0F06600g_CDS-001

Nucleotide sequence

 

>YALI0F06600g
ATGACGACACAAAAGGGCTTATTGCAACGCGTCCAGCTGTATCGAAAGCGCGTGGCTGCT
CTTGAAGAGGAGATACGCAAGCTAGAAAGCTCTCAGAGTGCCGAAAACGACGCTCAGGAG
CTCGTACAGCAGCTGCTCACCAGCAACAACGACAAGATAGATACTCAGCAACTGGAAGGA
GAAATTGGAGCCCAGCTGAACAAGGAAATCACCTCGAATCGCCAATTACAGACGGCTTTC
CATACCCTGAAATTGTCGATTGGCGACTCCTACTGGACGGGTGAAAGTCACCATGTTTCC
ATCATTCACGTTTCAGGACACTCATTTCAATGCCGAGTTGTGCTGACCAAAAGCATGGAG
AAGGTCACCGGACTGCGAGTTGAAGATGCGGACATCCCTGTGCTGAAGCCATTTGTTCAG
AGGTGCTGCAACCGCAGAAATGTCGTCGCATTGTTTGCAGGATTGGCTCGGTACGATGAG
CTGTCTATAGCACGGTACAGAGCCTTTGATAGTCTGTCGAGCCTTCAGAGCGCGTCCTTT
ACACCGTCTTATTCGCTCCCAACTGCCCAATTCAAATCTCCCCACGTGACTGTCACTCTA
GAATGGAGAATCGCCTTCCCCATGGACATAGGTATCCAGGGCAATGATAATGGCGATTAT
GACGACGACGAAGACGAGAACGAACTTATCAGCAAGATTATTATGCACGCTTACGGCTCG
CCAGAGTACCAGATTCAAGACCAAAAACAGCTGTTGAAACGGGTACCCGTTGTCTTTGAC
AAGCTCGTGAGGTTGAAGGGAGTTATTAAAGCTGCTGACATACTTATCAGAAGCCTGACC
ATGGATGGAAAGTGACAGGCAAGATTCGCATGACTTACGATATCATTGGTGGAACGAAAT
AATCACGGATATGGGTCCTTTCCGCTTCAAATTCGTTGACTACATCTGCGACCATGTACC
AGACAATTATTGGTGATGGGTCAATTGACAACTTCCAAGTCCATCGCGTTGTACTCAGCG
AAACCAGAATTACACGATTGATGGTGGTGTACTGGAAGGTGATATTCAACTGAAATAATG
TGAAGAATGCGTATGGTTGTCACTTTCCAGGAACAGCCTAACTGTCACCACTTCGTTGAC
TAGTACTGGTTCCCCAATTGCAGTGGAGAGATCTGAAGCAACAAGTACGCGGCAGTTCCA
AAGGCTCCCCCGAGACAAGTCAGCCCGCGTCCATACTCGAACTCAACTCAGATCACCGCC
TTCCCTCGGTACATGATGCAAGTACATTGATCCCAATAGAGAACATTCGGAAAGCTCGAA
TCAAACGGGTACCGTTGAACATACTGCTGGCCATGGCGAACACACCTCTCTTGCTGTGGA
ACAAACGGGTACCGTTGAGCATACCGCTGGGTATGACGAAGACATCTCTCATGCTGTGGA
ACAGCTATAACTAGACACACTTCCATAAAACAATGACAAATACAACTCTAGACTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06600g_CDS-001

Protein length: 285 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F06600g_CDS-001 MTTQKGLLQRVQLYRKRVAALEEEIRKLESSQSAENDAQELVQQLLTSNNDKIDTQQLEG
EIGAQLNKEITSNRQLQTAFHTLKLSIGDSYWTGESHHVSIIHVSGHSFQCRVVLTKSME
KVTGLRVEDADIPVLKPFVQRCCNRRNVVALFAGLARYDELSIARYRAFDSLSSLQSASF
TPSYSLPTAQFKSPHVTVTLEWRIAFPMDIGIQGNDNGDYDDDEDENELISKIIMHAYGS
PEYQIQDQKQLLKRVPVVFDKLVRLKGVIKAADILIRSLTMDGK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG