YALI0F06534g

Overview

Description weakly similar to uniprot|Q06683 Saccharomyces cerevisiae YDR332w
Locus type CDS
Locus tag YALI0F06534g

Location

Species Yarrowia lipolytica Positions 967073..969418
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2346 (nuc.)
Previous locus YALI0F06518r Next locus YALI0F06556g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06534g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06534gYALI0F06534g_mRNA-001YALI0F06534g_CDS-001

Nucleotide sequence

 

>YALI0F06534g
ATGCAATTATTTCGGAGTATACGCCATTTCCGGCCTCCGGGAGTGTTTCTACGCCATTTA
CAAACTCCCTCGACACCGCCAGACTTGCGAAAGTACCAGAAAGAATGCATTTCGGCATGT
TTGGACGCATTGAATGCCGGTAAACGACGAATCGCCGTCTCGCTGGCCACAGGAGGAGGC
AAGACGGTGATCTTCGCGAATCTGCTGAACCAGATTGCGGCCAAGAACACGGGTAACAAA
GTACTGATTCTTACCCATCGAAAGGAGCTCGCTACTCAGGCGCAAAATCAGATTTCACGG
TTCAATCCAGATCTGAAGGTCGAGATTGAAATGGGAACGACTGTGGCTGATCCCTCGGCA
GACGTGGTGGTTGCAGGCGTCCAAACACTGCAGGGCAAGCGTTTGGAGCAGCTGGATCCT
ACTGATTTCAAGGCCATTATCATTGACGAAGCACACCATGCCGCCAGTCAGTCGTATCTC
AACATCATTCAGCATTTCAAGGCTAGCAAGGCCAAAAGCGATGTCGCGGTGATCGGTTTT
ACGGCTACACTGTTTCGAACAGACACAAAGTCCCTTACTAAGGCGTTTGATCACGTGGTC
TATGACTTGTCGTTTATGGACATGATCAACGACGGCTGGCTGTCTAGTGTCAAGTTTTCG
ACTGTGATTTCCATGGCTGACCTGACCGAGGTGGAGATTGGTGCCGCAGGCGACTTCAAG
ACGTCGTCGCTTAGCAAGGTGGTCAACACGGACAGAATGAACAGTCTGGTGTTCCGAACG
TGGCAGAATATGACCGCGAAACACGGCTACAAGTCGACCATTGTGTTTTGCGTTGATGTT
CAGCACGTCAGGGATCTGGTGGAGCTGTTCCGATCCCAGGGGATCAATGCTGAAGGAGTT
ACAGGCACCACCAAACCGAAAACTCGTCAGGCCATCATTGATGAGTTCAAAAGCGGTGAT
ATACCGGTACTGTTCAACTGTGGCGTCTTTACTGAGGGCACAGACATTCCCAACATTGAT
CTGGTCATTCTGAACCGCCCTACAAAGTCCAAGGGTCTGATGATGCAGATGATCGGACGA
GGTCTGCGCTTACATCCCGGGAAAGACCACACCGCGGTGGTTGATCTTGTGGGGACAGTT
CCGGCAGGTATGGTGACTGCTCCGAGTCTTTTGGGACTTCCTTCAGGCCACCACTGTGAC
AGAGCATCGTTTGAGGAACTTCTGGAGGAGAAGAAGAAGACTAAGGACCCTGATCATGTG
GAGATTACAACGTTTTCTTCCCTCCAGGACTTTCTCGACTTTGGACGAGAAATCCAGGAC
GTGGAAGTGGAGGAAGGAGAGTACGGAGAAGGGTTTGCCAATCCTGACAACTGGATGCAT
CTTACCCCGAACTCCTGGGCTCTCGACAAGGGTAGTAGAGGCACGTGTGTTCGTTTGACC
ATTATTCCGGACTCGGACAGTATGATTGACGGTGAATCCAAGGTCAAGGCCAGTCTGGTG
ACCATGGGAGTTCCCGTTTTTGGCGACGGTAAGCGATGGAACTTTTTCGGCAAGACAGGT
ACCCTCATGGAGAAGGTGTTTGATTCCAAGAAGGACGCGTTCGATGCGGCTGCAGAAACG
CTGGAGAACAGCAAATACCTTCCTGAGATGCGGATCTGGGCGCAGAAGCTGAGATCGAGG
CCTGCCACTGACTCCCAAAAGAAGTTTCTCAAGCGACTGGTGGACAAGAGTCTCTACATG
CGTCAATCTGCGGACGTGGCCGTGCTCATGAAGCATGCTCAGAAGGCTCTGGAGACTCAG
ACGCCGATTGAGTTGACGGAGGAGCAGTTTCTGAAGCTGCGAGCTGCGGAACTCAAGTCG
TTCGTGGACAACATTGATATGGATCATGCCAAGTTGTGGATTTCGCGGCTCAAAATGACT
TCTGGAGAACTGTCGAGAATCTACAAGGCTTCTAACCTGGCTCAGGCCCAGAAGGCGTAT
AAGATTATGGTGGATCCGGTCGGAGAGCCGACATCGCTGGTGGGAGAGCTGAAGAGTAAG
AAGAAGGATACGTCGGTACAGGGGTTGAAGACGTTGATGAAGGGATGAGAGTCTCACTGC
AGGTCGACTGGCTGAGCATTGGAGCTGTGCATTGGCTGATACTGAGTCTAGTATTATATG
GAGATGACCAAGTAAGCCCTAGGTGCCATAGATGGCATGCCAGTTGCCCTAGGTGCGTGC
CTGGTGACGACTCACTGGCTGAACCGAGCTCTTGGGGTCGTCGTGAGGCCAACTGAGGAC
TTTCACTAATGTTGGGTTCTATGTACATAGATGAATTATAGACCACGAAAGTATCGATGA
TAGCTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06534g_CDS-001

Protein length: 696 aa.
Product: Conserved hypothetical protein

>YALI0F06534g_CDS-001 MQLFRSIRHFRPPGVFLRHLQTPSTPPDLRKYQKECISACLDALNAGKRRIAVSLATGGG
KTVIFANLLNQIAAKNTGNKVLILTHRKELATQAQNQISRFNPDLKVEIEMGTTVADPSA
DVVVAGVQTLQGKRLEQLDPTDFKAIIIDEAHHAASQSYLNIIQHFKASKAKSDVAVIGF
TATLFRTDTKSLTKAFDHVVYDLSFMDMINDGWLSSVKFSTVISMADLTEVEIGAAGDFK
TSSLSKVVNTDRMNSLVFRTWQNMTAKHGYKSTIVFCVDVQHVRDLVELFRSQGINAEGV
TGTTKPKTRQAIIDEFKSGDIPVLFNCGVFTEGTDIPNIDLVILNRPTKSKGLMMQMIGR
GLRLHPGKDHTAVVDLVGTVPAGMVTAPSLLGLPSGHHCDRASFEELLEEKKKTKDPDHV
EITTFSSLQDFLDFGREIQDVEVEEGEYGEGFANPDNWMHLTPNSWALDKGSRGTCVRLT
IIPDSDSMIDGESKVKASLVTMGVPVFGDGKRWNFFGKTGTLMEKVFDSKKDAFDAAAET
LENSKYLPEMRIWAQKLRSRPATDSQKKFLKRLVDKSLYMRQSADVAVLMKHAQKALETQ
TPIELTEEQFLKLRAAELKSFVDNIDMDHAKLWISRLKMTSGELSRIYKASNLAQAQKAY
KIMVDPVGEPTSLVGELKSKKKDTSVQGLKTLMKG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG